Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | P1Y72_RS06810 | Genome accession | NZ_CP119599 |
| Coordinates | 1405559..1406512 (+) | Length | 317 a.a. |
| NCBI ID | WP_136274080.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain 1133 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1400559..1411512
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1Y72_RS06770 (P1Y72_06770) | - | 1401386..1401751 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| P1Y72_RS06775 (P1Y72_06775) | comYA | 1401844..1402782 (+) | 939 | WP_002986557.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| P1Y72_RS06780 (P1Y72_06780) | comYB | 1402718..1403752 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| P1Y72_RS06785 (P1Y72_06785) | comYC | 1403754..1404080 (+) | 327 | WP_032465607.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| P1Y72_RS06790 (P1Y72_06790) | comGD | 1404055..1404483 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| P1Y72_RS06795 (P1Y72_06795) | comGE | 1404440..1404724 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| P1Y72_RS06800 (P1Y72_06800) | comYF | 1404717..1405151 (+) | 435 | WP_023612536.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| P1Y72_RS06805 (P1Y72_06805) | comGG | 1405135..1405461 (+) | 327 | WP_136274078.1 | competence type IV pilus minor pilin ComGG | - |
| P1Y72_RS06810 (P1Y72_06810) | comYH | 1405559..1406512 (+) | 954 | WP_136274080.1 | class I SAM-dependent methyltransferase | Machinery gene |
| P1Y72_RS06815 (P1Y72_06815) | - | 1406571..1407767 (+) | 1197 | WP_023612537.1 | acetate kinase | - |
| P1Y72_RS06820 (P1Y72_06820) | - | 1407954..1408262 (+) | 309 | WP_010921804.1 | hypothetical protein | - |
| P1Y72_RS06825 (P1Y72_06825) | proC | 1408345..1409115 (-) | 771 | WP_136274084.1 | pyrroline-5-carboxylate reductase | - |
| P1Y72_RS06830 (P1Y72_06830) | pepA | 1409163..1410230 (-) | 1068 | WP_136263717.1 | glutamyl aminopeptidase | - |
| P1Y72_RS06835 (P1Y72_06835) | - | 1410695..1410979 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| P1Y72_RS06840 (P1Y72_06840) | - | 1410976..1411293 (+) | 318 | WP_011285355.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36013.13 Da Isoelectric Point: 4.7205
>NTDB_id=800068 P1Y72_RS06810 WP_136274080.1 1405559..1406512(+) (comYH) [Streptococcus pyogenes strain 1133]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLVPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=800068 P1Y72_RS06810 WP_136274080.1 1405559..1406512(+) (comYH) [Streptococcus pyogenes strain 1133]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAAATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGTACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACACTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |
| comYH | Streptococcus mutans UA140 |
65.506 |
99.685 |
0.653 |