Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   P1Y72_RS05435 Genome accession   NZ_CP119599
Coordinates   1138322..1139035 (-) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 1133     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1133322..1144035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1Y72_RS05400 (P1Y72_05400) - 1133472..1133618 (+) 147 WP_002982210.1 hypothetical protein -
  P1Y72_RS05405 (P1Y72_05405) - 1133647..1134582 (+) 936 WP_010922750.1 Gfo/Idh/MocA family oxidoreductase -
  P1Y72_RS05410 (P1Y72_05410) - 1134591..1135100 (+) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  P1Y72_RS05415 (P1Y72_05415) nrdG 1135100..1135714 (+) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  P1Y72_RS05420 (P1Y72_05420) yaaA 1135888..1136619 (-) 732 WP_010922748.1 peroxide stress protein YaaA -
  P1Y72_RS05425 (P1Y72_05425) - 1136661..1137518 (-) 858 WP_136273972.1 VOC family protein -
  P1Y72_RS05430 (P1Y72_05430) - 1137777..1138043 (+) 267 WP_076640006.1 helix-turn-helix domain-containing protein -
  P1Y72_RS05435 (P1Y72_05435) treR 1138322..1139035 (-) 714 WP_002992823.1 trehalose operon repressor Regulator
  P1Y72_RS05440 (P1Y72_05440) treP 1139246..1141270 (+) 2025 WP_010922746.1 PTS system trehalose-specific EIIBC component -
  P1Y72_RS05445 (P1Y72_05445) treC 1141337..1142965 (+) 1629 WP_010922745.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=800058 P1Y72_RS05435 WP_002992823.1 1138322..1139035(-) (treR) [Streptococcus pyogenes strain 1133]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=800058 P1Y72_RS05435 WP_002992823.1 1138322..1139035(-) (treR) [Streptococcus pyogenes strain 1133]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675