Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P1Y72_RS04110 Genome accession   NZ_CP119599
Coordinates   872116..872841 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 1133     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 867116..877841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1Y72_RS04075 (P1Y72_04075) - 867150..867446 (-) 297 WP_002983486.1 YlxR family protein -
  P1Y72_RS04080 (P1Y72_04080) nusA 867462..868619 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  P1Y72_RS04085 (P1Y72_04085) rimP 868794..869330 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  P1Y72_RS04095 (P1Y72_04095) trmB 869589..870224 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  P1Y72_RS04100 (P1Y72_04100) - 870224..871015 (-) 792 WP_002983385.1 phosphotransferase family protein -
  P1Y72_RS04105 (P1Y72_04105) - 871079..872113 (-) 1035 WP_010922583.1 ABC transporter permease -
  P1Y72_RS04110 (P1Y72_04110) pptA 872116..872841 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  P1Y72_RS04115 (P1Y72_04115) - 872913..873332 (+) 420 WP_002983376.1 HIT family protein -
  P1Y72_RS04120 (P1Y72_04120) - 873329..873685 (+) 357 WP_002988657.1 hypothetical protein -
  P1Y72_RS04125 (P1Y72_04125) - 873796..875070 (-) 1275 WP_010922584.1 LCP family protein -
  P1Y72_RS04130 (P1Y72_04130) - 875079..875603 (-) 525 WP_009880752.1 N-acetyltransferase -
  P1Y72_RS04135 (P1Y72_04135) tsaE 875578..876039 (-) 462 WP_136278107.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  P1Y72_RS04140 (P1Y72_04140) - 876193..877653 (-) 1461 WP_011285677.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=800050 P1Y72_RS04110 WP_002983379.1 872116..872841(-) (pptA) [Streptococcus pyogenes strain 1133]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=800050 P1Y72_RS04110 WP_002983379.1 872116..872841(-) (pptA) [Streptococcus pyogenes strain 1133]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714