Detailed information NTG0799924

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: P1K87_RS16830
• Genome accession: NZ_CP119596
• Coordinates: 3407418..3408581 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain MG-2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3402418..3413581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P1K87_RS16800 (P1K87_16800)	-	3402682..3403101 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
P1K87_RS16805 (P1K87_16805)	comFC	3403175..3403864 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
P1K87_RS16810 (P1K87_16810)	-	3403870..3404154 (-)	285	WP_003151389.1	competence protein ComFB	-
P1K87_RS16815 (P1K87_16815)	comFA	3404212..3405597 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
P1K87_RS16820 (P1K87_16820)	-	3405706..3406554 (-)	849	WP_032876160.1	DegV family protein	-
P1K87_RS16825 (P1K87_16825)	degU	3406652..3407341 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
P1K87_RS16830 (P1K87_16830)	degS	3407418..3408581 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
P1K87_RS16835 (P1K87_16835)	-	3408804..3409451 (+)	648	WP_007614107.1	YigZ family protein	-
P1K87_RS16840 (P1K87_16840)	-	3409456..3410637 (+)	1182	WP_032876157.1	LCP family protein	-
P1K87_RS16845 (P1K87_16845)	-	3410736..3411812 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
P1K87_RS16850 (P1K87_16850)	-	3411945..3413141 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=799924 P1K87_RS16830 WP_007407484.1 3407418..3408581(-) (degS) [Bacillus amyloliquefaciens strain MG-2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=799924 P1K87_RS16830 WP_007407484.1 3407418..3408581(-) (degS) [Bacillus amyloliquefaciens strain MG-2]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951