Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | RFN60_RS12830 | Genome accession | NZ_CP133653 |
| Coordinates | 2499199..2500326 (+) | Length | 375 a.a. |
| NCBI ID | WP_004398842.1 | Uniprot ID | P45943 |
| Organism | Bacillus subtilis strain CP38 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2494199..2505326
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RFN60_RS12800 (RFN60_12800) | - | 2494777..2494955 (-) | 179 | Protein_2475 | hypothetical protein | - |
| RFN60_RS12805 (RFN60_12805) | arsC | 2495310..2495729 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| RFN60_RS12810 (RFN60_12810) | acr3 | 2495741..2496781 (-) | 1041 | WP_032722149.1 | arsenite efflux transporter Acr3 | - |
| RFN60_RS12815 (RFN60_12815) | arsK | 2496804..2497244 (-) | 441 | WP_032722151.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| RFN60_RS12820 (RFN60_12820) | arsR | 2497303..2497620 (-) | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| RFN60_RS12825 (RFN60_12825) | yqcI | 2497992..2498756 (-) | 765 | WP_017696291.1 | YqcI/YcgG family protein | - |
| RFN60_RS12830 (RFN60_12830) | rapC | 2499199..2500326 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | Regulator |
| RFN60_RS12835 (RFN60_12835) | phrE | 2500316..2500450 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| RFN60_RS12840 (RFN60_12840) | - | 2500560..2500718 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| RFN60_RS12845 (RFN60_12845) | yqcG | 2501088..2502683 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| RFN60_RS12850 (RFN60_12850) | yqcF | 2502698..2503276 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| RFN60_RS12855 (RFN60_12855) | - | 2503394..2503540 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| RFN60_RS12860 (RFN60_12860) | - | 2503537..2503899 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| RFN60_RS12865 (RFN60_12865) | - | 2503915..2504394 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44636.38 Da Isoelectric Point: 7.3392
>NTDB_id=799847 RFN60_RS12830 WP_004398842.1 2499199..2500326(+) (rapC) [Bacillus subtilis strain CP38]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
NKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTRAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
NKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTRAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=799847 RFN60_RS12830 WP_004398842.1 2499199..2500326(+) (rapC) [Bacillus subtilis strain CP38]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGCCATAAAATTATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AATAAAATTGAGGGCCATAAGAAAAAATTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAGAGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATACAACATTTATAAGAAACACGAGCTTTACTCTGTTCGTCGTATTCAGTGCCATTTTGTCATTGCCGGTAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGCTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTATTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTTCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTAACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGCCATAAAATTATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AATAAAATTGAGGGCCATAAGAAAAAATTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAGAGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATACAACATTTATAAGAAACACGAGCTTTACTCTGTTCGTCGTATTCAGTGCCATTTTGTCATTGCCGGTAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCCGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGCTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTATTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTTCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |