Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RDV59_RS07755 Genome accession   NZ_CP133476
Coordinates   1583693..1584391 (-) Length   232 a.a.
NCBI ID   WP_038676313.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LMG 11489     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578693..1589391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV59_RS07730 (RDV59_07730) - 1578743..1579102 (-) 360 WP_126405085.1 hypothetical protein -
  RDV59_RS07735 (RDV59_07735) - 1579118..1581022 (-) 1905 WP_060775868.1 FtsX-like permease family protein -
  RDV59_RS07740 (RDV59_07740) - 1581009..1581761 (-) 753 WP_269465085.1 ABC transporter ATP-binding protein -
  RDV59_RS07745 (RDV59_07745) - 1581787..1582560 (-) 774 WP_038676311.1 TraX family protein -
  RDV59_RS07750 (RDV59_07750) - 1582690..1583703 (-) 1014 WP_060775869.1 HAMP domain-containing sensor histidine kinase -
  RDV59_RS07755 (RDV59_07755) braR 1583693..1584391 (-) 699 WP_038676313.1 response regulator transcription factor Regulator
  RDV59_RS07760 (RDV59_07760) - 1584458..1584894 (+) 437 Protein_1486 Mbeg1-like protein -
  RDV59_RS07765 (RDV59_07765) - 1584993..1586012 (-) 1020 WP_038676316.1 YdcF family protein -
  RDV59_RS07770 (RDV59_07770) - 1586240..1586596 (-) 357 Protein_1488 transposase -
  RDV59_RS07775 (RDV59_07775) - 1586756..1587208 (+) 453 WP_021145095.1 DUF3290 family protein -
  RDV59_RS07780 (RDV59_07780) - 1587205..1587837 (+) 633 WP_038676319.1 DUF421 domain-containing protein -
  RDV59_RS07785 (RDV59_07785) - 1587904..1588101 (+) 198 WP_008534959.1 CsbD family protein -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 26443.10 Da        Isoelectric Point: 4.8059

>NTDB_id=799714 RDV59_RS07755 WP_038676313.1 1583693..1584391(-) (braR) [Streptococcus salivarius strain LMG 11489]
MNYKIMIVEDDPDIAELVSRHLEKFGFTIEKCIEFHNVLKEFEKAKPHLVLLDINLPAYDGFYWCGKIREKSSCPIIFMS
SRNADSDQVYAMMNGGDDYVTKPFSLDVLTAKVTAILRRTYGEYVTAVTNDLSCGDCSFSQNRLVLRCNGKETELSKTEA
GVIRIMFQNYPDVVSREDLLNEIWDNDNFVEENTLNVTISRIRKRLDGIGSTLNIKPVRGIGYRLGDDGDEK

Nucleotide


Download         Length: 699 bp        

>NTDB_id=799714 RDV59_RS07755 WP_038676313.1 1583693..1584391(-) (braR) [Streptococcus salivarius strain LMG 11489]
ATGAATTATAAAATTATGATTGTAGAGGATGATCCAGATATTGCAGAATTGGTTTCACGCCATTTGGAGAAATTTGGATT
TACTATTGAAAAATGTATAGAGTTCCATAATGTTTTAAAAGAATTTGAAAAAGCAAAACCACATCTGGTGCTGTTGGATA
TTAATCTGCCTGCCTATGATGGATTTTATTGGTGCGGAAAAATCAGAGAAAAAAGTTCCTGTCCGATTATTTTTATGTCT
TCCCGTAATGCAGATTCGGATCAGGTGTATGCGATGATGAATGGTGGAGACGATTATGTGACAAAGCCGTTTTCACTGGA
TGTGCTTACAGCAAAGGTTACAGCCATTCTTCGCCGTACTTATGGTGAATATGTCACAGCTGTTACGAATGATTTGAGTT
GTGGAGACTGTAGCTTTTCACAAAATCGTCTGGTACTTCGGTGCAATGGGAAAGAAACGGAATTATCTAAGACAGAAGCA
GGCGTAATACGGATCATGTTTCAGAACTATCCGGATGTCGTAAGCCGCGAAGATCTTCTGAATGAAATTTGGGATAATGA
TAATTTTGTGGAGGAAAACACTTTAAATGTGACCATCAGCAGGATCCGTAAACGCTTAGACGGTATCGGCTCTACGTTGA
ATATAAAACCAGTCAGAGGCATAGGATATCGTTTGGGAGATGATGGAGATGAAAAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.359

96.121

0.388