Detailed information NTG0799689

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CupriaWKF_RS01855
• Genome accession: NZ_CP119572
• Coordinates: 386075..387193 (-)
• Length: 372 a.a.
• NCBI ID: WP_276099354.1
• Uniprot ID: -
• Organism: Cupriavidus sp. WKF15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 381075..392193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CupriaWKF_RS01830 (CupriaWKF_01830)	ntrB	381149..382051 (-)	903	WP_276099349.1	nitrate ABC transporter permease	-
CupriaWKF_RS01835 (CupriaWKF_01835)	-	382113..383426 (-)	1314	WP_276099350.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
CupriaWKF_RS01840 (CupriaWKF_01840)	-	383784..384437 (-)	654	WP_276099351.1	ANTAR domain-containing protein	-
CupriaWKF_RS01845 (CupriaWKF_01845)	-	384654..385355 (+)	702	WP_276099352.1	fumarylacetoacetate hydrolase family protein	-
CupriaWKF_RS01850 (CupriaWKF_01850)	maiA	385360..386007 (+)	648	WP_276099353.1	maleylacetoacetate isomerase	-
CupriaWKF_RS01855 (CupriaWKF_01855)	pilA	386075..387193 (-)	1119	WP_276099354.1	signal recognition particle-docking protein FtsY	Machinery gene
CupriaWKF_RS01860 (CupriaWKF_01860)	-	387388..388908 (+)	1521	WP_276099355.1	pitrilysin family protein	-
CupriaWKF_RS01865 (CupriaWKF_01865)	-	388952..390307 (+)	1356	WP_276100633.1	pitrilysin family protein	-
CupriaWKF_RS01870 (CupriaWKF_01870)	rsmD	390390..391034 (+)	645	WP_276099356.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CupriaWKF_RS01875 (CupriaWKF_01875)	coaD	391209..391694 (+)	486	WP_276099357.1	pantetheine-phosphate adenylyltransferase	-
CupriaWKF_RS01880 (CupriaWKF_01880)	-	391764..392024 (+)	261	WP_011296529.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 39635.86 Da
• Isoelectric Point: 7.3629

>NTDB_id=799689 CupriaWKF_RS01855 WP_276099354.1 386075..387193(-) (pilA) [Cupriavidus sp. WKF15]
MFSFWKKRKAEPAPAPAEPPAAAPAPTPAPTPAPSPKADPAQSLAPAPAAVVTAAPAALEDLELTPAPAQTAEARRGWMQ
RLRTGLSKTSRNISTLFVGMKVDEALFEELETALLMADAGVEATEYLLGELRKRVRNERIETAEGVKAALRDLLIQLLRP
LEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTVVAQESGDPAA
VIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNALAQTRAFDDALGLTG
LIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG

Nucleotide

• Length: 1119 bp

>NTDB_id=799689 CupriaWKF_RS01855 WP_276099354.1 386075..387193(-) (pilA) [Cupriavidus sp. WKF15]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCCGCTCCTGCGCCGGCAGAACCGCCCGCTGCTGCCCCGGCTCCCAC
CCCGGCTCCCACCCCGGCACCCTCCCCCAAAGCCGATCCGGCCCAGTCCCTGGCCCCGGCTCCCGCAGCGGTCGTGACTG
CTGCCCCGGCCGCGCTCGAGGACCTGGAGCTGACCCCGGCGCCGGCGCAAACGGCTGAAGCGCGCCGCGGCTGGATGCAG
CGCCTGCGCACCGGCCTGTCCAAGACCAGCCGCAACATCAGCACGCTGTTTGTCGGCATGAAGGTCGACGAAGCCCTGTT
CGAGGAGCTGGAAACCGCCCTGTTGATGGCCGACGCCGGCGTGGAAGCGACCGAATACCTGCTCGGCGAACTGCGCAAGC
GCGTACGCAACGAGCGCATCGAAACGGCCGAGGGCGTCAAGGCCGCGCTGCGCGACCTGCTGATCCAGCTGCTGCGCCCG
CTGGAAAAGACCATGGCGCTGGGCCGCGAGCAGCCGCTGGTGATGATGATCGCGGGCGTCAATGGCGCCGGCAAGACCAC
AAGCATCGGCAAGCTGTGCAAGCACTTCCAGCACTACGGCCAGTCCGTGCTGCTGGCCGCCGGCGATACCTTCCGCGCCG
CCGCGCGCGAGCAGCTCACCATCTGGGGCGAGCGCAACAACGTGACCGTGGTGGCGCAGGAAAGCGGCGACCCGGCCGCG
GTGATCTTCGACGCGGTCAATGCGGCGCGCGCGCGCGGGATCGACATCGTGATGGCCGACACCGCCGGACGCCTGCCCAC
GCAGCTGCACCTGATGGAAGAACTCAAGAAGGTCAAGCGCGTGATCAGCAAGGCCATGCCCACGGCCCCGCACGAGGTCC
TGCTGGTGATCGATGCCAACACCGGCCAGAACGCGCTGGCGCAGACGCGCGCGTTCGACGACGCGCTCGGGCTGACCGGC
CTGATCGTGACCAAGCTCGACGGTACGGCCAAGGGCGGCATCCTGGCGGCGATTGCACGCCAGCGCCCGGTCCCGGTCTA
CTTCATCGGTGTCGGCGAGAAGGTGGAAGACCTGCAGCCGTTCAAGGCCGAAGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (93-152)

• SRP54-type protein, GTPase domain (SRP54) (173-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.309	92.204	0.538