Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   RDV58_RS06865 Genome accession   NZ_CP133475
Coordinates   1367732..1369504 (-) Length   590 a.a.
NCBI ID   WP_002280368.1    Uniprot ID   -
Organism   Streptococcus mutans strain LMG 14558     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1362732..1374504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV58_RS06860 (RDV58_06850) - 1366696..1367616 (-) 921 WP_002280369.1 AEC family transporter -
  RDV58_RS06865 (RDV58_06855) rcrQ 1367732..1369504 (-) 1773 WP_002280368.1 ABC transporter ATP-binding protein Regulator
  RDV58_RS06870 (RDV58_06860) rcrP 1369515..1371251 (-) 1737 WP_002280367.1 ABC transporter ATP-binding protein Regulator
  RDV58_RS06875 (RDV58_06865) - 1371708..1373576 (-) 1869 WP_002280366.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66771.54 Da        Isoelectric Point: 7.2588

>NTDB_id=799596 RDV58_RS06865 WP_002280368.1 1367732..1369504(-) (rcrQ) [Streptococcus mutans strain LMG 14558]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMARGVQGAHLNISYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSKKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLCLNLTLAAIILVCIPLTYFSSRFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQVNQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKTANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=799596 RDV58_RS06865 WP_002280368.1 1367732..1369504(-) (rcrQ) [Streptococcus mutans strain LMG 14558]
ATGAAAAAGAAAACTGTTTTTTTACGCTTATGGTATTATTTGAAGACCTATAAAGGTTCACTTTTTTTGGCCATTTTCTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAACCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACCTAA
TTGATATGGCTCGCGGAGTTCAAGGCGCTCATCTTAATATCAGTTATATCACCATGATTTTGTTTCTTTATTTTTTACGC
GGATTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGTATTTACGATTTGCG
TCATGATTTAAGTAAAAAGATTAATAAGATTCCCGTTTCCTATTTTGATAAACATCAATTTGGTGATATGTTAGGACGTT
TTACTAATGACGTTGAAACGGTCTCTAACGCTTTGCAGCAGAGCTTTCTGCAAATTATTAATGCCTTTTTAACGATTATC
CTTGTTGTGGTTATGGTACTCTGCCTTAATTTGACCTTGGCGGCGATTATTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCGTTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGGCGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATACATTTGGCAAGTCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGACGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAAGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCGGCCAAGACAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTATTAACCATCGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCGGATAAGATTCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAGGGGAACCATCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.857

100

0.451