Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   RDV58_RS03505 Genome accession   NZ_CP133475
Coordinates   671468..672274 (+) Length   268 a.a.
NCBI ID   WP_002274530.1    Uniprot ID   -
Organism   Streptococcus mutans strain LMG 14558     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 666468..677274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV58_RS03475 (RDV58_03475) - 666664..667620 (+) 957 WP_002262677.1 branched-chain amino acid ABC transporter permease -
  RDV58_RS03480 (RDV58_03480) - 667620..668384 (+) 765 WP_002262678.1 ABC transporter ATP-binding protein -
  RDV58_RS03485 (RDV58_03485) - 668384..669094 (+) 711 WP_002262679.1 ABC transporter ATP-binding protein -
  RDV58_RS03490 (RDV58_03490) - 669210..669869 (+) 660 WP_002264029.1 CBS domain-containing protein -
  RDV58_RS03495 (RDV58_03495) tmk 669945..670583 (+) 639 WP_002264028.1 dTMP kinase -
  RDV58_RS03500 (RDV58_03500) - 670596..671471 (+) 876 WP_002280200.1 DNA polymerase III subunit delta' -
  RDV58_RS03505 (RDV58_03505) yaaT 671468..672274 (+) 807 WP_002274530.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  RDV58_RS03510 (RDV58_03510) yabA 672267..672599 (+) 333 WP_002271433.1 DNA replication initiation control protein YabA -
  RDV58_RS03515 (RDV58_03515) rsmI 672605..673471 (+) 867 WP_002264025.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  RDV58_RS03520 (RDV58_03520) - 673776..675011 (+) 1236 WP_002280199.1 ammonium transporter -
  RDV58_RS03525 (RDV58_03525) - 675027..675368 (+) 342 WP_002264023.1 P-II family nitrogen regulator -
  RDV58_RS03530 (RDV58_03530) serC 675588..676679 (+) 1092 WP_002280198.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  RDV58_RS03535 (RDV58_03535) - 676797..676937 (+) 141 WP_002270504.1 hypothetical protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 30353.87 Da        Isoelectric Point: 5.1029

>NTDB_id=799564 RDV58_RS03505 WP_002274530.1 671468..672274(+) (yaaT) [Streptococcus mutans strain LMG 14558]
MIEVIGIKYEETDSISYVLPDRTYQKDDFLVVQNRKGSRLAQVVQENFAMSADKLPDIEQIDKVLRKAEQADIETYQNNL
ILAEESFAKVNALIQKNQLEMKLIDIVFPLERRQVLITFVAEHRVDFRQLLKDLANFFKARIELHQINSREESKIYGGLG
PCGRALCCSSFLGEFPPVSIKMAKNQNLSLNSGKTTGVCGRLMCCLSFEDDFYRESKEKFPDLGTKVNTQNGQGIIAGID
VISETVKVRFEETPGLLTYALEEVKING

Nucleotide


Download         Length: 807 bp        

>NTDB_id=799564 RDV58_RS03505 WP_002274530.1 671468..672274(+) (yaaT) [Streptococcus mutans strain LMG 14558]
ATGATAGAAGTAATTGGTATCAAATACGAAGAAACGGATAGCATTAGTTATGTACTGCCTGATCGGACCTATCAAAAGGA
TGATTTCCTTGTCGTTCAGAATCGTAAGGGAAGCCGTTTAGCACAAGTTGTTCAGGAAAATTTTGCTATGTCAGCCGACA
AGCTTCCAGACATAGAGCAAATAGATAAAGTTTTGAGAAAGGCAGAGCAAGCAGATATTGAGACTTATCAGAACAATTTA
ATTTTAGCAGAAGAAAGTTTTGCTAAAGTTAATGCACTTATCCAAAAAAATCAATTAGAAATGAAATTGATTGATATTGT
TTTTCCTTTGGAACGTCGGCAAGTCTTGATTACCTTTGTTGCAGAGCATCGTGTTGATTTTCGTCAGCTCTTAAAAGATT
TGGCCAATTTTTTTAAAGCAAGGATTGAATTACACCAAATCAATAGTCGTGAAGAAAGTAAAATTTATGGCGGTCTGGGT
CCGTGCGGCCGTGCTCTTTGTTGCTCAAGCTTTCTTGGCGAGTTTCCGCCGGTTTCTATCAAAATGGCAAAGAATCAAAA
CTTATCTCTGAATTCTGGGAAAACAACAGGAGTCTGTGGCCGTCTTATGTGCTGTTTAAGTTTTGAAGATGATTTTTATC
GTGAATCCAAAGAAAAATTTCCTGATTTAGGTACTAAGGTCAATACTCAAAATGGCCAAGGTATTATTGCTGGTATTGAT
GTTATTTCTGAAACTGTTAAGGTTCGTTTTGAAGAAACTCCTGGTCTTTTGACCTATGCATTAGAGGAGGTCAAGATCAA
TGGATAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(63-147)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.132

98.881

0.407