Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   P2C01_RS17865 Genome accession   NZ_CP119522
Coordinates   545018..546115 (-) Length   365 a.a.
NCBI ID   WP_004726763.1    Uniprot ID   A0A0Q2SGB9
Organism   Vibrio furnissii strain C1     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 540018..551115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P2C01_RS17845 - 540572..540943 (+) 372 WP_055465617.1 YgiW/YdeI family stress tolerance OB fold protein -
  P2C01_RS17850 - 541095..541619 (+) 525 WP_004726759.1 hypothetical protein -
  P2C01_RS17855 - 541744..542424 (+) 681 WP_275725535.1 flagellar brake protein -
  P2C01_RS17860 luxQ 542421..544997 (-) 2577 WP_275725537.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  P2C01_RS17865 luxP 545018..546115 (-) 1098 WP_004726763.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  P2C01_RS17870 - 546535..546825 (-) 291 WP_004726765.1 GIY-YIG nuclease family protein -
  P2C01_RS17875 - 546836..547471 (-) 636 WP_275725540.1 YceH family protein -
  P2C01_RS17880 - 547515..547712 (-) 198 WP_014257418.1 hypothetical protein -
  P2C01_RS17885 - 547902..548219 (+) 318 WP_004726770.1 DUF496 family protein -
  P2C01_RS17890 - 548604..550025 (+) 1422 WP_275725543.1 alpha/beta hydrolase -
  P2C01_RS17895 - 550142..550729 (+) 588 WP_275725544.1 hypothetical protein -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 41539.74 Da        Isoelectric Point: 5.2793

>NTDB_id=799477 P2C01_RS17865 WP_004726763.1 545018..546115(-) (luxP) [Vibrio furnissii strain C1]
MKKTLFLSLLLGFTPFASSYSSQVLNGYWHYQEFLNANPQQKALTESLSDAVRQSSQRLTVKQQTPVTISVVYPGQQISD
YWVRNIKAFEMRLEELGIEYQINQVFTRPNQDTRQQSLSLMEAVKNNTDYLIFTLDTTRHRKFIEHVLNSSPTKLILQNI
TTPVRDWDERQPMMYVGFDHELGAQQLAQYYREHVPKGSKYSVLYFSEGYVSDARGDTFIQQMESTGDYQLASSYYTKAT
QESGYEATVNIVKNDPDIKFIYACSTDVALGAAKALQALKREDIQVNGWGGGSAELEALDEGHLDVTVMRINDDTGIAMA
EAIKRDLEGLAVPVVYSGDFEIVTKDDQPKKIGLFKQRAFRYSDR

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=799477 P2C01_RS17865 WP_004726763.1 545018..546115(-) (luxP) [Vibrio furnissii strain C1]
ATGAAGAAAACGCTTTTTCTTTCTCTTTTACTTGGTTTCACTCCTTTTGCCTCTTCGTATTCATCACAAGTGCTGAATGG
TTACTGGCATTATCAGGAATTTCTGAATGCCAATCCGCAACAAAAGGCACTGACGGAGTCGTTGTCTGATGCGGTGCGTC
AGTCATCTCAGCGGCTGACGGTCAAACAACAAACGCCGGTGACCATTTCGGTGGTTTATCCGGGGCAACAGATCTCCGAT
TACTGGGTGCGCAACATCAAAGCATTTGAAATGCGATTGGAAGAGTTAGGCATCGAATACCAGATTAATCAGGTATTTAC
GCGCCCGAACCAAGACACTCGTCAACAAAGCTTGTCGTTGATGGAAGCGGTGAAGAACAACACGGATTATTTGATTTTCA
CGCTGGATACAACGCGCCACCGCAAGTTTATTGAACACGTTCTGAATTCGTCACCGACCAAATTGATTTTGCAGAATATC
ACCACGCCAGTTCGAGACTGGGATGAACGCCAGCCGATGATGTACGTTGGGTTTGACCATGAACTCGGTGCGCAGCAACT
TGCGCAGTATTATCGCGAGCATGTTCCCAAAGGCAGCAAGTATTCGGTGCTGTATTTCTCTGAAGGGTACGTCAGCGATG
CGCGTGGCGACACTTTCATTCAGCAGATGGAAAGCACGGGCGATTACCAGCTGGCCTCGTCGTATTACACCAAAGCGACC
CAAGAAAGTGGCTATGAAGCCACCGTTAACATTGTCAAAAATGACCCGGATATTAAATTTATTTATGCCTGTTCCACCGA
TGTGGCACTGGGCGCAGCCAAGGCGCTACAAGCGCTAAAACGTGAAGATATTCAGGTGAATGGCTGGGGTGGTGGCTCGG
CAGAGCTAGAAGCCTTGGATGAAGGTCATCTTGATGTTACTGTCATGAGAATCAATGATGATACCGGCATTGCGATGGCG
GAAGCGATCAAACGTGATTTGGAAGGTTTGGCCGTGCCCGTGGTGTATTCCGGTGACTTTGAGATCGTGACCAAAGACGA
TCAGCCGAAAAAAATTGGTTTGTTTAAGCAACGCGCCTTTCGTTATTCCGACCGTTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q2SGB9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

70.411

100

0.704