Detailed information NTG0079945

Bioinformatically predicted

Overview

• Name: sinR
• Type: Regulator
• Locus tag: L6479_RS06615
• Genome accession: NZ_AP022921
• Coordinates: 1276623..1276946 (-)
• Length: 107 a.a.
• NCBI ID: WP_236787872.1
• Uniprot ID: -
• Organism: Bacillus cereus strain J1
• Function: repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation

Genomic Context

Location: 1271623..1281946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6479_RS06590 (BCJMU01_1214)	-	1271956..1273242 (+)	1287	WP_236787853.1	D-alanyl-D-alanine carboxypeptidase family protein	-
L6479_RS06595 (BCJMU01_1215)	-	1273434..1274003 (+)	570	WP_000767813.1	signal peptidase I	-
L6479_RS06600 (BCJMU01_1216)	-	1274066..1274653 (+)	588	WP_062921647.1	CalY family protein	-
L6479_RS06605 (BCJMU01_1217)	-	1274817..1275680 (+)	864	WP_236787861.1	DUF4047 domain-containing protein	-
L6479_RS06610 (BCJMU01_1218)	calY	1275954..1276547 (+)	594	WP_236787870.1	biofilm matrix protein CalY	-
L6479_RS06615 (BCJMU01_1219)	sinR	1276623..1276946 (-)	324	WP_236787872.1	helix-turn-helix domain-containing protein	Regulator
L6479_RS06620 (BCJMU01_1220)	-	1277026..1277160 (-)	135	WP_000276217.1	anti-repressor SinI family protein	-
L6479_RS06625 (BCJMU01_1221)	inhA1	1277504..1279891 (+)	2388	WP_236787874.1	immune inhibitor A domain-containing protein	-
L6479_RS06630 (BCJMU01_1222)	-	1280062..1281429 (+)	1368	WP_062921650.1	aldehyde dehydrogenase	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12368.20 Da
• Isoelectric Point: 8.5404

>NTDB_id=79945 L6479_RS06615 WP_236787872.1 1276623..1276946(-) (sinR) [Bacillus cereus strain J1]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLF
KDAMNSGVSKEQFREFLEFTKWKQDQK

Nucleotide

• Length: 324 bp

>NTDB_id=79945 L6479_RS06615 WP_236787872.1 1276623..1276946(-) (sinR) [Bacillus cereus strain J1]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCTTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (6-60)

• Anti-repressor SinI (SinI) (72-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sinR	Bacillus subtilis subsp. subtilis str. 168	66.972	100	0.682