Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   P2C01_RS02460 Genome accession   NZ_CP119521
Coordinates   504122..504640 (+) Length   172 a.a.
NCBI ID   WP_014205765.1    Uniprot ID   A0A0Q2V091
Organism   Vibrio furnissii strain C1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 499122..509640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P2C01_RS02450 gshA 501924..503489 (+) 1566 WP_004723866.1 glutamate--cysteine ligase -
  P2C01_RS02455 - 503491..504096 (+) 606 WP_044367718.1 hypothetical protein -
  P2C01_RS02460 luxS 504122..504640 (+) 519 WP_014205765.1 S-ribosylhomocysteine lyase Regulator
  P2C01_RS02465 - 504747..506021 (-) 1275 WP_004723872.1 HlyC/CorC family transporter -
  P2C01_RS02470 - 506112..506906 (-) 795 WP_004723874.1 cytochrome C assembly family protein -
  P2C01_RS02475 ffh 507119..508498 (+) 1380 WP_004723876.1 signal recognition particle protein -
  P2C01_RS02480 rpsP 508724..508972 (+) 249 WP_004723879.1 30S ribosomal protein S16 -
  P2C01_RS02485 rimM 509000..509554 (+) 555 WP_004723882.1 ribosome maturation factor RimM -

Sequence

Protein


Download         Length: 172 a.a.        Molecular weight: 18856.59 Da        Isoelectric Point: 4.6766

>NTDB_id=799445 P2C01_RS02460 WP_014205765.1 504122..504640(+) (luxS) [Vibrio furnissii strain C1]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTMPNKDILSEKGIHTLEHLYAGFMRAHLNGANVEIIDISP
MGCRTGFYMSLIGAPSEEQVAAAWLASMQDVLSVESQDQIPELNEYQCGTAAMHSLNEAKAIAETVIAAGIQVNKNDELA
LPESMLNELKVH

Nucleotide


Download         Length: 519 bp        

>NTDB_id=799445 P2C01_RS02460 WP_014205765.1 504122..504640(+) (luxS) [Vibrio furnissii strain C1]
ATGCCATTATTAGACAGTTTTACCGTCGATCACACTCGCATGAACGCACCGGCTGTGCGTGTTGCGAAAACCATGCAAAC
GCCGAAAGGCGACACCATTACGGTGTTTGACCTGCGTTTCACCATGCCAAACAAAGACATTCTGTCCGAGAAAGGGATTC
ATACGCTGGAGCATCTGTACGCCGGCTTTATGCGTGCGCACCTCAATGGCGCGAACGTGGAAATTATCGACATCTCGCCG
ATGGGATGTCGCACCGGGTTTTACATGAGCCTGATTGGTGCGCCAAGCGAAGAGCAAGTCGCTGCCGCTTGGTTGGCGTC
GATGCAAGACGTATTGAGTGTCGAAAGCCAGGATCAAATTCCTGAGCTGAACGAATACCAGTGCGGCACCGCAGCGATGC
ACTCCCTGAATGAAGCCAAAGCGATTGCTGAAACCGTGATTGCCGCAGGCATTCAGGTCAACAAGAACGACGAACTGGCG
CTGCCCGAATCGATGCTCAATGAGCTGAAAGTGCACTAA

Domains

Predicted by InterproScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-154)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q2V091

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

91.279

100

0.913