Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P0M04_RS12905 Genome accession   NZ_CP119520
Coordinates   2875694..2876095 (+) Length   133 a.a.
NCBI ID   WP_259449668.1    Uniprot ID   -
Organism   Telluria mixta strain ACM 1762     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2870694..2881095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P0M04_RS12880 (P0M04_12890) - 2871320..2871733 (-) 414 WP_259449664.1 cbb3-type cytochrome c oxidase subunit I -
  P0M04_RS12885 (P0M04_12895) - 2871827..2873104 (-) 1278 WP_259449665.1 NRAMP family divalent metal transporter -
  P0M04_RS12890 (P0M04_12900) hemL 2873121..2874422 (-) 1302 WP_259449666.1 glutamate-1-semialdehyde 2,1-aminomutase -
  P0M04_RS12895 (P0M04_12905) - 2874463..2875284 (-) 822 WP_259449667.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  P0M04_RS12900 (P0M04_12910) - 2875379..2875531 (+) 153 WP_029755924.1 rubredoxin -
  P0M04_RS12905 (P0M04_12915) pilG 2875694..2876095 (+) 402 WP_259449668.1 PleD family two-component system response regulator Regulator
  P0M04_RS12910 (P0M04_12920) - 2876118..2876486 (+) 369 WP_025511923.1 PleD family two-component system response regulator -
  P0M04_RS12915 (P0M04_12925) - 2876488..2877012 (+) 525 WP_259449669.1 chemotaxis protein CheW -
  P0M04_RS12920 (P0M04_12930) - 2877050..2879392 (+) 2343 WP_259449670.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14400.53 Da        Isoelectric Point: 7.3832

>NTDB_id=799426 P0M04_RS12905 WP_259449668.1 2875694..2876095(+) (pilG) [Telluria mixta strain ACM 1762]
MTTQPTGLTIMVIDDSSTIRRSAEIFLTQAGYHVVLAEDGFDALAKINDHHPSLVFCDILMPRLDGYQTCALIKKSAKFH
ATPVVMLSSKDGLFDRARGTMVGSSAYLTKPFSKDSLLAAVRDHAQGRTDAAA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=799426 P0M04_RS12905 WP_259449668.1 2875694..2876095(+) (pilG) [Telluria mixta strain ACM 1762]
ATGACGACGCAACCGACAGGCCTGACGATCATGGTGATCGACGACAGCAGCACGATCCGTCGGTCCGCCGAAATCTTCCT
GACGCAGGCCGGCTACCACGTGGTGCTGGCCGAAGACGGCTTCGACGCGCTGGCCAAGATCAACGACCATCATCCGTCCC
TGGTGTTCTGCGACATCCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAGAGCGCGAAATTCCAT
GCCACGCCGGTCGTCATGCTGTCCTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCACGATGGTGGGCTCGAGCGCCTA
CCTGACCAAACCTTTTTCCAAGGACAGCCTGCTGGCGGCCGTGCGCGACCATGCGCAGGGCCGGACCGACGCGGCTGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.559

88.722

0.564