Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   P1T45_RS10810 Genome accession   NZ_CP119427
Coordinates   2053609..2054322 (+) Length   237 a.a.
NCBI ID   WP_037620338.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP45     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2048609..2059322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1T45_RS10800 (P1T45_10805) treC 2049688..2051310 (-) 1623 WP_308695469.1 alpha,alpha-phosphotrehalase -
  P1T45_RS10805 (P1T45_10810) treP 2051378..2053387 (-) 2010 WP_003108947.1 PTS system trehalose-specific EIIBC component -
  P1T45_RS10810 (P1T45_10815) treR 2053609..2054322 (+) 714 WP_037620338.1 trehalose operon repressor Regulator
  P1T45_RS10815 (P1T45_10820) - 2054346..2054672 (-) 327 WP_003108945.1 helix-turn-helix domain-containing protein -
  P1T45_RS10820 (P1T45_10825) - 2054874..2055728 (+) 855 WP_003108943.1 VOC family protein -
  P1T45_RS10825 (P1T45_10830) yaaA 2055781..2056512 (+) 732 WP_003108941.1 peroxide stress protein YaaA -
  P1T45_RS10830 (P1T45_10835) nrdG 2056630..2057244 (-) 615 WP_003104313.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  P1T45_RS10835 (P1T45_10840) - 2057259..2057753 (-) 495 WP_003108940.1 GNAT family N-acetyltransferase -
  P1T45_RS10840 (P1T45_10845) - 2057734..2058696 (-) 963 WP_003108938.1 Gfo/Idh/MocA family protein -
  P1T45_RS10845 (P1T45_10850) - 2058720..2058869 (-) 150 WP_003108936.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27687.92 Da        Isoelectric Point: 8.0440

>NTDB_id=799270 P1T45_RS10810 WP_037620338.1 2053609..2054322(+) (treR) [Streptococcus parauberis strain KSP45]
MKKYERIFKDLEEKIAKEIYAIDDFLPTEIELCKEYDASRDTIRKSLNLLAKAGLVKSQQGRGTQVIKHHQILFPISELT
SYHELVSYFNMDSKTNVIAIDKLIVDKYVSKLTGFKENTIIWRITRQRVVDGVASVLDIDYLNKDIVPTISREIAEVSLY
QYLEKELHLPIDFALKEVTIDQINDRDKILLDLGSDKHVVSVKSKVYLSNNEQFQFTESRHKLEKFKFVDFARRNPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=799270 P1T45_RS10810 WP_037620338.1 2053609..2054322(+) (treR) [Streptococcus parauberis strain KSP45]
ATGAAAAAATATGAACGCATTTTCAAAGATTTAGAAGAAAAAATTGCCAAAGAAATTTATGCTATTGATGACTTTTTACC
AACTGAAATTGAACTCTGTAAAGAGTATGATGCAAGTAGAGATACTATTCGTAAGTCACTGAACCTTCTAGCGAAAGCTG
GACTAGTTAAAAGCCAACAAGGTCGTGGAACTCAAGTCATCAAACACCATCAAATATTATTCCCCATTTCTGAATTAACG
AGTTATCATGAGTTAGTTTCCTACTTCAATATGGATTCGAAAACAAATGTTATTGCTATTGATAAATTAATTGTAGACAA
ATATGTTTCAAAATTAACTGGCTTCAAAGAAAATACAATTATCTGGCGAATCACCCGTCAGCGTGTTGTTGATGGCGTTG
CCTCAGTTTTAGACATTGATTACTTGAATAAGGATATAGTCCCTACAATCTCAAGAGAAATTGCTGAAGTATCACTTTAT
CAATATTTGGAGAAAGAACTCCACTTACCAATTGATTTTGCCTTAAAAGAAGTTACAATTGACCAAATCAATGATCGGGA
TAAAATTTTACTAGATTTAGGATCTGACAAACATGTTGTCTCTGTGAAATCAAAAGTCTATTTGTCAAATAATGAACAAT
TCCAATTTACAGAAAGCCGGCATAAATTAGAAAAATTCAAATTTGTTGACTTTGCCAGACGAAATCCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(92-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.681

99.156

0.641