Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P1T45_RS09265 Genome accession   NZ_CP119427
Coordinates   1736242..1736967 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain KSP45     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1731242..1741967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1T45_RS09230 (P1T45_09235) rnpM 1731290..1731568 (-) 279 WP_037620247.1 RNase P modulator RnpM -
  P1T45_RS09235 (P1T45_09240) nusA 1731600..1732754 (-) 1155 WP_003108096.1 transcription termination factor NusA -
  P1T45_RS09240 (P1T45_09245) rimP 1732843..1733325 (-) 483 WP_003107545.1 ribosome maturation factor RimP -
  P1T45_RS09250 (P1T45_09255) trmB 1733719..1734354 (-) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  P1T45_RS09255 (P1T45_09260) ccrZ 1734354..1735144 (-) 791 Protein_1772 cell cycle regulator CcrZ -
  P1T45_RS09260 (P1T45_09265) - 1735205..1736239 (-) 1035 WP_003107548.1 ABC transporter permease -
  P1T45_RS09265 (P1T45_09270) pptA 1736242..1736967 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  P1T45_RS09270 (P1T45_09275) - 1737229..1737648 (+) 420 WP_003108095.1 HIT family protein -
  P1T45_RS09275 (P1T45_09280) - 1737645..1737947 (+) 303 WP_003108094.1 hypothetical protein -
  P1T45_RS09280 (P1T45_09285) - 1737980..1739241 (-) 1262 Protein_1777 LCP family protein -
  P1T45_RS09285 (P1T45_09290) - 1739276..1739800 (-) 525 WP_003107553.1 GNAT family N-acetyltransferase -
  P1T45_RS09290 (P1T45_09295) tsaE 1739787..1740236 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  P1T45_RS09295 (P1T45_09300) - 1740325..1741785 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=799262 P1T45_RS09265 WP_003105648.1 1736242..1736967(-) (pptA) [Streptococcus parauberis strain KSP45]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=799262 P1T45_RS09265 WP_003105648.1 1736242..1736967(-) (pptA) [Streptococcus parauberis strain KSP45]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACACACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722