Detailed information NTG0799201

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: PTW35_RS15175
• Genome accession: NZ_CP119423
• Coordinates: 3332005..3335391 (+)
• Length: 1128 a.a.
• NCBI ID: WP_281025706.1
• Uniprot ID: -
• Organism: Photobacterium sp. DA100
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3327005..3340391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTW35_RS15160 (PTW35_15160)	hemL	3327866..3329164 (+)	1299	WP_281025703.1	glutamate-1-semialdehyde 2,1-aminomutase	-
PTW35_RS15165 (PTW35_15165)	-	3329479..3330564 (+)	1086	WP_281025704.1	AI-2E family transporter	-
PTW35_RS15170 (PTW35_15170)	rsmC	3330667..3331686 (+)	1020	WP_281025705.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
PTW35_RS15175 (PTW35_15175)	chiS	3332005..3335391 (+)	3387	WP_281025706.1	response regulator	Regulator
PTW35_RS15180 (PTW35_15180)	-	3335997..3337676 (+)	1680	WP_281025707.1	ABC transporter substrate-binding protein	-
PTW35_RS15185 (PTW35_15185)	-	3337811..3338797 (+)	987	WP_044624236.1	ABC transporter permease	-
PTW35_RS15190 (PTW35_15190)	-	3338800..3339825 (+)	1026	WP_281025708.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126912.45 Da
• Isoelectric Point: 5.3240

>NTDB_id=799201 PTW35_RS15175 WP_281025706.1 3332005..3335391(+) (chiS) [Photobacterium sp. DA100]
MQQTTRLKRLQHTLMLAFLVLSITPLILSALFFLNSHTKDLSEQSTNHLASLLDNKKKQLNNFFASRESEVQSFARSELA
NASGGRFYGLVGAYHQLGDISEVLRNTGRSRYYTETLINKSAGEQDTGNYIGHERYRLMYKRYNWAYEEYLKRSSFSDIL
LVDISGNIVYAANSPDIFGINLPQSAQTYPALSQTFSAIQKKTERSEGETDQVPVTFTDFSQSQGEADLAAWFAAPIIQQ
GYLHSYVLFKLSNQSIRDFLSDTGNNSYSVQTLLVGQDHRSRLPTSSNDPASFSSSSINRALEGDSGVGSFANFNGVPVL
SAFAPLTIMDSPWALVVELPEEEAFARIRQLEVIFFVAMLTAIVLVIIASHWLSNSITAPLLRLTWAAEQVSAGDMDQKI
EGTERCDEIGRLAISFARMQSSVREKMTLIREQNNELEQSIQIIQQKNKELQTADKLKDEFLATTSHELRTPLHGMVGIA
ESLLAGANGPVQHSQRRQLEVMINSGQRLTNLVDDLLDYHKMRYGDLDIHKQAVDVASAARLVLELSGHLLGSKPVRIIN
QIPNDLPLVQGDEQRLEQVLYNLVGNAIKYTSEGKIILSATILESQLRIQVVDTGQGIPAEQLEHIFEPLIQANTQSANY
RQGSGLGLSISRQLIELMGGRLYVSSQPMIGTTFSFTLNLASEADIANSELSDRSRHFQIPSVEAQAYELEHIEENPDGE
LLLIVDDEPVNLQVLHNFLRLEGYRVITAESGPQALKLVESHQPALMLLDIMMPEMSGYEVCEQLRQRYNMLDLPIIMLS
ALGQVQDRIRGFESGANDYLTKPFNKEELTARIGAHLKAGQTERQLKENQRLAEEIERREQVENSLLETQNRLLGLLESS
NEAILCVQSGGRIRYANAAAGKLFNRSPEQVERHHIEDILATHLPQDISQSHHFHGSLMFRIGDSLQSLDTDVINLPEES
GLQRMFIFDNQGQTSSHRIEVLENAVEVLSGFAFNRNKDSLQKLRHLGDEFCSLADKLEGNSKSKNDTLRELLVDIMKTT
LNHWEESTQKTKFELAEESGLWRVYLDRSTLQTRTLDKYLHLETLPKTPRWRTVLSTIDFVLERSPCNTAAHSELLAMKE
QLQHIINQ

Nucleotide

• Length: 3387 bp

>NTDB_id=799201 PTW35_RS15175 WP_281025706.1 3332005..3335391(+) (chiS) [Photobacterium sp. DA100]
ATGCAGCAGACTACCCGTTTAAAGCGTCTCCAGCACACCTTAATGCTGGCTTTTTTAGTTTTGAGTATTACCCCGTTAAT
ACTGTCGGCCCTCTTCTTCCTGAACTCACATACCAAGGATCTGTCTGAGCAGAGCACGAATCACCTTGCCTCCCTGCTCG
ACAACAAGAAGAAACAACTCAACAACTTCTTTGCCAGCCGGGAATCAGAGGTACAAAGTTTTGCCCGCTCCGAACTGGCC
AATGCCAGCGGAGGGCGTTTTTATGGCCTGGTCGGTGCTTACCACCAGCTCGGCGATATCTCCGAGGTGCTACGCAATAC
CGGTAGGAGCCGCTACTACACCGAAACCTTGATCAACAAGTCAGCCGGCGAACAGGATACCGGCAACTATATAGGTCACG
AGCGCTACCGGCTGATGTACAAACGCTACAACTGGGCCTACGAAGAGTACCTCAAGCGCTCAAGCTTCAGTGACATTCTA
CTGGTTGATATCAGCGGGAATATTGTCTATGCCGCCAATAGCCCTGACATCTTCGGCATTAACCTTCCGCAATCAGCCCA
GACATACCCGGCACTAAGCCAAACGTTCTCGGCAATCCAGAAAAAAACCGAACGTTCAGAAGGAGAAACCGATCAAGTAC
CGGTTACCTTTACCGACTTTAGCCAATCACAAGGCGAAGCGGATCTTGCCGCGTGGTTTGCCGCCCCAATCATCCAGCAA
GGCTATTTGCACAGCTACGTGCTCTTCAAGCTGAGCAACCAATCAATCCGCGACTTCCTTAGTGATACCGGCAATAACTC
CTATTCGGTCCAAACCCTGCTGGTAGGCCAAGACCACCGCTCCAGACTGCCGACCTCCAGCAATGATCCTGCCTCTTTTT
CCAGTAGCAGCATCAACCGTGCCCTTGAGGGAGACAGCGGCGTCGGCAGCTTCGCCAACTTCAACGGTGTTCCCGTGCTC
AGTGCCTTTGCCCCGCTCACCATTATGGATAGCCCCTGGGCGCTGGTGGTCGAGCTGCCAGAAGAAGAAGCCTTCGCCCG
TATCCGCCAGCTAGAGGTGATCTTCTTTGTTGCCATGCTGACGGCCATTGTGCTGGTCATTATCGCCTCGCACTGGCTGT
CGAACTCCATCACCGCCCCCCTGCTGCGTCTCACCTGGGCTGCGGAACAAGTCTCGGCCGGTGACATGGACCAAAAGATC
GAGGGAACCGAGCGCTGTGACGAAATCGGTCGTCTGGCGATCAGCTTTGCCCGGATGCAGTCCTCGGTGAGGGAAAAAAT
GACCCTGATCCGCGAGCAAAACAACGAGCTGGAGCAGAGTATCCAGATCATCCAGCAGAAAAACAAAGAGCTGCAGACCG
CCGATAAACTCAAGGATGAATTCCTGGCCACCACATCCCATGAACTGCGTACCCCGCTCCATGGCATGGTCGGGATTGCC
GAGTCGCTGCTGGCCGGTGCCAACGGCCCGGTCCAGCATTCGCAACGGCGCCAGCTTGAAGTGATGATCAACAGCGGCCA
GCGACTGACCAACCTGGTTGATGATCTGCTCGACTACCACAAGATGCGCTACGGCGATCTCGATATCCATAAACAAGCGG
TGGATGTTGCCTCCGCTGCCAGGTTGGTACTGGAGCTCTCCGGCCATCTGCTCGGCAGCAAACCGGTACGTATCATCAAC
CAGATCCCCAATGACTTGCCTCTGGTACAGGGTGATGAACAGCGGCTGGAGCAAGTTCTCTACAACTTGGTCGGCAACGC
CATTAAGTACACCTCGGAAGGAAAAATCATTCTTTCCGCCACCATCCTAGAATCCCAGCTGCGCATTCAGGTGGTCGATA
CCGGCCAGGGGATCCCGGCCGAACAGCTGGAACACATCTTCGAGCCACTGATCCAGGCCAATACCCAGTCGGCCAACTAC
CGCCAAGGCTCCGGCCTCGGCCTGTCAATCAGCCGCCAGCTCATCGAGCTGATGGGGGGACGGCTGTATGTCAGCAGCCA
GCCAATGATCGGTACCACCTTCAGTTTCACCCTCAACCTCGCTTCCGAAGCCGATATTGCCAACAGCGAGCTGTCCGACC
GCAGCCGCCACTTCCAGATTCCCTCCGTGGAAGCCCAGGCCTACGAACTGGAGCACATCGAGGAAAACCCCGATGGCGAG
TTGCTGCTCATTGTTGACGATGAGCCGGTGAACCTGCAGGTGCTTCACAACTTCCTCCGCCTCGAGGGTTACCGGGTGAT
CACCGCAGAAAGTGGCCCGCAAGCGCTGAAACTGGTCGAGAGCCACCAGCCAGCACTGATGCTGCTGGATATCATGATGC
CGGAAATGTCAGGCTATGAAGTGTGTGAACAATTACGCCAGCGCTACAATATGCTGGATCTCCCGATCATCATGCTGTCG
GCACTCGGGCAGGTACAGGATAGGATCCGAGGCTTCGAATCAGGGGCCAATGATTACCTCACCAAGCCGTTCAACAAAGA
GGAGCTGACGGCACGGATCGGCGCCCACCTCAAAGCCGGGCAAACCGAGCGTCAGCTCAAGGAGAACCAGCGCCTTGCCG
AAGAAATCGAACGCCGGGAGCAGGTGGAAAACAGCCTGCTGGAAACCCAAAACCGCTTGCTTGGCTTGCTGGAGTCCTCC
AACGAGGCAATTCTCTGCGTCCAAAGCGGGGGGCGGATACGCTATGCCAATGCCGCGGCAGGCAAGCTCTTCAACCGCTC
GCCGGAGCAGGTTGAGCGCCACCATATCGAAGATATCCTGGCCACTCACCTGCCTCAGGATATCAGCCAAAGTCACCACT
TCCACGGCAGCTTGATGTTCCGGATCGGCGATAGCCTCCAGTCCCTTGATACCGATGTCATCAATCTCCCCGAAGAGTCG
GGACTACAAAGGATGTTTATCTTCGATAACCAAGGCCAAACCAGCAGCCACCGTATAGAAGTGCTCGAAAATGCCGTCGA
AGTACTGTCGGGGTTCGCCTTCAACCGCAACAAGGACAGTCTGCAGAAGCTGCGCCATCTGGGTGACGAGTTCTGCTCCC
TGGCAGACAAGCTCGAGGGCAACAGCAAAAGCAAGAATGACACCCTGCGGGAGCTGCTGGTCGACATCATGAAAACCACC
CTCAATCACTGGGAAGAGTCGACCCAAAAAACCAAGTTTGAACTGGCAGAGGAAAGTGGCCTGTGGCGGGTCTATCTCGA
CCGTAGCACCCTGCAAACCCGCACGCTGGATAAATACCTGCATTTGGAAACCCTGCCGAAAACGCCCCGCTGGCGTACCG
TACTCAGTACCATTGATTTTGTCCTTGAGCGCAGCCCTTGCAATACCGCGGCCCATTCCGAGCTGCTGGCAATGAAGGAG
CAGCTGCAGCACATTATCAATCAATAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (372-424)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (571-680)

• Response regulator receiver domain (Response_reg) (723-833)

• His Kinase A (phospho-acceptor) domain (HisKA) (458-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.788	99.911	0.567