Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RDU00_RS15185 Genome accession   NZ_CP133449
Coordinates   2868713..2869408 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain KK195     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2863713..2874408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDU00_RS15165 (RDU00_15160) yttA 2864140..2864886 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  RDU00_RS15170 (RDU00_15165) bceB 2864923..2866863 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  RDU00_RS15175 (RDU00_15170) bceA 2866853..2867614 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  RDU00_RS15180 (RDU00_15175) bceS 2867716..2868720 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  RDU00_RS15185 (RDU00_15180) braR 2868713..2869408 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  RDU00_RS15190 (RDU00_15185) ytrF 2869505..2870815 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  RDU00_RS15195 (RDU00_15190) ytrE 2870805..2871500 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  RDU00_RS15200 (RDU00_15195) ytrD 2871515..2872492 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  RDU00_RS15205 (RDU00_15200) ytrC 2872522..2873508 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  RDU00_RS15210 (RDU00_15205) ytrB 2873502..2874380 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=799157 RDU00_RS15185 WP_004399109.1 2868713..2869408(-) (braR) [Bacillus subtilis strain KK195]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=799157 RDU00_RS15185 WP_004399109.1 2868713..2869408(-) (braR) [Bacillus subtilis strain KK195]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377