Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Q7Q33_RS20495 Genome accession   NZ_CP133412
Coordinates   3869939..3870628 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain KK001     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3864939..3875628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7Q33_RS20475 (Q7Q33_20455) yxeA 3865844..3866191 (-) 348 WP_003227084.1 YxeA family protein -
  Q7Q33_RS20480 (Q7Q33_20460) yxdM 3866205..3868073 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  Q7Q33_RS20485 (Q7Q33_20465) yxdL 3868048..3868821 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  Q7Q33_RS20490 (Q7Q33_20470) yxdK 3868965..3869942 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  Q7Q33_RS20495 (Q7Q33_20475) braR 3869939..3870628 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  Q7Q33_RS20500 (Q7Q33_20480) iolJ 3870736..3871608 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  Q7Q33_RS20505 (Q7Q33_20485) iolI 3871629..3872465 (-) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  Q7Q33_RS20510 (Q7Q33_20490) iolH 3872551..3873420 (-) 870 WP_003243149.1 sugar phosphate isomerase/epimerase family protein -
  Q7Q33_RS20515 (Q7Q33_20495) iolG 3873440..3874474 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=798943 Q7Q33_RS20495 WP_003243527.1 3869939..3870628(-) (braR) [Bacillus subtilis strain KK001]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=798943 Q7Q33_RS20495 WP_003243527.1 3869939..3870628(-) (braR) [Bacillus subtilis strain KK001]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406