Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   Q3101_RS04030 Genome accession   NZ_CP133215
Coordinates   873476..874114 (+) Length   212 a.a.
NCBI ID   WP_226485124.1    Uniprot ID   A0ABV5DBU8
Organism   Streptomyces sp. VNUA74     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 868476..879114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3101_RS04005 (Q3101_04005) - 868711..869064 (-) 354 WP_283015422.1 DUF190 domain-containing protein -
  Q3101_RS04010 (Q3101_04010) - 869061..869546 (-) 486 WP_283015421.1 CrcB family protein -
  Q3101_RS04015 (Q3101_04015) - 870317..871000 (-) 684 WP_256031418.1 ABC transporter ATP-binding protein -
  Q3101_RS04020 (Q3101_04020) - 870997..872085 (-) 1089 WP_308882657.1 ABC transporter permease -
  Q3101_RS04025 (Q3101_04025) - 872259..873479 (+) 1221 WP_308882658.1 sensor histidine kinase -
  Q3101_RS04030 (Q3101_04030) vraR 873476..874114 (+) 639 WP_226485124.1 response regulator transcription factor Regulator
  Q3101_RS04035 (Q3101_04035) - 874142..874558 (-) 417 WP_283015417.1 arsenate reductase ArsC -
  Q3101_RS04040 (Q3101_04040) arsB 874551..875660 (-) 1110 WP_308882660.1 ACR3 family arsenite efflux transporter -
  Q3101_RS04045 (Q3101_04045) - 875657..876037 (-) 381 WP_256031411.1 helix-turn-helix transcriptional regulator -
  Q3101_RS04050 (Q3101_04050) arsM 876132..876950 (+) 819 WP_308882661.1 arsenite methyltransferase -
  Q3101_RS04055 (Q3101_04055) - 877319..877741 (-) 423 WP_064726625.1 YjbQ family protein -
  Q3101_RS04060 (Q3101_04060) - 877828..878907 (+) 1080 WP_064726626.1 NAD(P)-binding domain-containing protein -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 22140.31 Da        Isoelectric Point: 5.0698

>NTDB_id=798729 Q3101_RS04030 WP_226485124.1 873476..874114(+) (vraR) [Streptomyces sp. VNUA74]
MTEDTPIRLLLADDHPVVRAGLRAVLETEPGLLVMAEAATAEDAVIRAAEGDIDVVLMDLQFGKGMGGAEATAQITARPG
APRVLIVTTYDSDADTLPAIEAGATGYLLKDAPPEDLAAAVRTAAAGRTTLAPTVADRLMNRLRAPATNLTRRETQVLSL
VADGLSNQAIGARLHLTEGTVKSHLARIYAKLGTDSRTAAVATATDLGLIRR

Nucleotide


Download         Length: 639 bp        

>NTDB_id=798729 Q3101_RS04030 WP_226485124.1 873476..874114(+) (vraR) [Streptomyces sp. VNUA74]
GTGACCGAAGACACCCCCATCCGGCTGCTCCTGGCCGACGACCACCCCGTCGTGCGGGCCGGACTGCGCGCCGTACTGGA
AACCGAACCCGGCCTCCTCGTCATGGCCGAAGCCGCCACCGCCGAGGACGCCGTCATCCGCGCCGCCGAAGGCGACATCG
ACGTGGTCCTGATGGACCTACAGTTCGGCAAAGGCATGGGCGGCGCCGAGGCCACCGCCCAGATCACCGCCCGCCCCGGC
GCCCCCCGCGTGCTGATCGTCACCACCTACGACTCCGACGCCGACACCCTGCCCGCCATCGAAGCCGGCGCCACCGGCTA
CCTCCTCAAGGACGCCCCTCCCGAAGACTTGGCCGCAGCCGTGCGCACCGCGGCCGCCGGCCGCACCACACTCGCCCCCA
CTGTCGCCGACCGGCTGATGAACCGGCTCCGCGCTCCCGCCACCAACCTGACCCGCCGGGAAACCCAAGTCCTCTCACTG
GTCGCCGACGGACTGTCCAACCAAGCCATCGGCGCACGCCTCCACCTGACCGAAGGCACCGTCAAATCTCACCTGGCCCG
CATCTACGCCAAGCTCGGAACCGACTCGCGCACCGCCGCCGTAGCCACCGCCACCGACCTCGGGCTCATCCGCCGCTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(149-203)

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

37.019

98.113

0.363