Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | L6498_RS06425 | Genome accession | NZ_AP022907 |
| Coordinates | 1252890..1253213 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus cereus strain MRY14-0100 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1247890..1258213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6498_RS06400 (BCM0100_1173) | - | 1248135..1249421 (+) | 1287 | WP_000245999.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| L6498_RS06405 (BCM0100_1174) | - | 1249615..1250184 (+) | 570 | WP_000767810.1 | signal peptidase I | - |
| L6498_RS06410 | - | 1250245..1250828 (+) | 584 | Protein_1176 | TasA family protein | - |
| L6498_RS06415 (BCM0100_1177) | - | 1250989..1251795 (+) | 807 | WP_017560862.1 | DUF4047 domain-containing protein | - |
| L6498_RS06420 (BCM0100_1178) | calY | 1252219..1252812 (+) | 594 | WP_000053735.1 | biofilm matrix protein CalY | - |
| L6498_RS06425 (BCM0100_1179) | sinR | 1252890..1253213 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| L6498_RS06430 (BCM0100_1180) | - | 1253293..1253427 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| L6498_RS06435 (BCM0100_1181) | inhA1 | 1253771..1256158 (+) | 2388 | WP_001035926.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| L6498_RS06440 (BCM0100_1183) | - | 1256331..1257698 (+) | 1368 | WP_236804240.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=79846 L6498_RS06425 WP_000578878.1 1252890..1253213(-) (sinR) [Bacillus cereus strain MRY14-0100]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=79846 L6498_RS06425 WP_000578878.1 1252890..1253213(-) (sinR) [Bacillus cereus strain MRY14-0100]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |