Detailed information NTG0079824

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: L6495_RS26135
• Genome accession: NZ_AP022903
• Coordinates: 5020715..5022064 (-)
• Length: 449 a.a.
• NCBI ID: WP_236787299.1
• Uniprot ID: -
• Organism: Bacillus cereus strain MRY14-0079
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5015715..5027064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6495_RS26115 (BCM0079_5194)	secA	5016037..5018544 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
L6495_RS26120 (BCM0079_5195)	raiA	5018821..5019363 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
L6495_RS26125 (BCM0079_5196)	cspC	5019687..5019884 (-)	198	WP_033656419.1	cold shock protein CspC	-
L6495_RS26130 (BCM0079_5197)	comFC	5020011..5020715 (-)	705	WP_062921932.1	comF operon protein ComFC	-
L6495_RS26135 (BCM0079_5198)	comFA	5020715..5022064 (-)	1350	WP_236787299.1	ATP-dependent helicase ComFA	Machinery gene
L6495_RS26140 (BCM0079_5199)	-	5022192..5023620 (-)	1429	Protein_5104	NlpC/P60 family protein	-
L6495_RS26145 (BCM0079_5200)	-	5023768..5024082 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
L6495_RS26150 (BCM0079_5201)	-	5024256..5025098 (-)	843	WP_236787300.1	DegV family protein	-
L6495_RS26155 (BCM0079_5202)	-	5025338..5025973 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51305.95 Da
• Isoelectric Point: 9.5085

>NTDB_id=79824 L6495_RS26135 WP_236787299.1 5020715..5022064(-) (comFA) [Bacillus cereus strain MRY14-0079]
MVAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGIIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KERAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEISLLLKELDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=79824 L6495_RS26135 WP_236787299.1 5020715..5022064(-) (comFA) [Bacillus cereus strain MRY14-0079]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTATTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAGAGCGGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGTAATTGGAAGAAAA
GCCTTCACCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGCCTGTTATTGAAAGAGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.675	93.096	0.481