Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   PY247_RS03715 Genome accession   NZ_CP119223
Coordinates   808174..808500 (-) Length   108 a.a.
NCBI ID   WP_004656310.1    Uniprot ID   A0A653K7L0
Organism   Acinetobacter proteolyticus strain AP54     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 803174..813500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY247_RS03695 (PY247_03695) - 803419..804036 (-) 618 WP_004656301.1 FHA domain-containing protein -
  PY247_RS03700 (PY247_03700) gspD 804100..806373 (-) 2274 WP_275573656.1 type II secretion system secretin GspD -
  PY247_RS03705 (PY247_03705) - 806414..807253 (-) 840 WP_101235847.1 type II secretion system protein N -
  PY247_RS03710 (PY247_03710) gspN 807253..807996 (-) 744 WP_004656309.1 type II secretion system protein N -
  PY247_RS03715 (PY247_03715) hns 808174..808500 (-) 327 WP_004656310.1 H-NS histone family protein Regulator
  PY247_RS03720 (PY247_03720) - 808898..809329 (-) 432 WP_004656313.1 thioesterase family protein -
  PY247_RS03725 (PY247_03725) - 809338..810531 (-) 1194 WP_275573657.1 heme biosynthesis protein HemY -
  PY247_RS03730 (PY247_03730) - 810538..811365 (-) 828 WP_004656317.1 hypothetical protein -
  PY247_RS03735 (PY247_03735) - 811362..812137 (-) 776 Protein_722 uroporphyrinogen-III synthase -
  PY247_RS03740 (PY247_03740) hemC 812137..813056 (-) 920 Protein_723 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12258.92 Da        Isoelectric Point: 5.0269

>NTDB_id=798208 PY247_RS03715 WP_004656310.1 808174..808500(-) (hns) [Acinetobacter proteolyticus strain AP54]
MKPDISDLSVEDLKRLQAEAEALIASKKDQAIEDAYNQIIAIADAIGYSVEELLEVGEQKRKKTTRKAVEPRYRNKSNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=798208 PY247_RS03715 WP_004656310.1 808174..808500(-) (hns) [Acinetobacter proteolyticus strain AP54]
ATGAAACCAGATATTAGCGATTTATCTGTAGAAGATTTAAAGCGTTTACAAGCAGAAGCAGAAGCTTTGATTGCAAGTAA
AAAAGATCAAGCAATTGAAGATGCATATAATCAAATTATCGCGATTGCAGATGCGATTGGTTATAGCGTTGAAGAATTAT
TGGAAGTGGGTGAGCAAAAGCGTAAGAAAACCACGCGTAAAGCAGTAGAGCCACGCTACCGTAACAAGAGCAATGCTGAA
GAAACTTGGACTGGCCGTGGTAAGCAACCACGTTGGTTAGTTGCTGAATTAGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(13-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653K7L0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

87.037

100

0.87