Detailed information NTG0798121

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PZA07_RS27575
• Genome accession: NZ_CP119181
• Coordinates: 5923904..5924950 (-)
• Length: 348 a.a.
• NCBI ID: WP_394817558.1
• Uniprot ID: -
• Organism: Achromobacter xylosoxidans strain L7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5918904..5929950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PZA07_RS27555 (PZA07_27565)	phnC	5919268..5920038 (+)	771	WP_020926355.1	phosphonate ABC transporter ATP-binding protein	-
PZA07_RS27560 (PZA07_27570)	phnE	5920038..5920937 (+)	900	WP_026384726.1	phosphonate ABC transporter, permease protein PhnE	-
PZA07_RS27565 (PZA07_27575)	phnE	5920934..5921758 (+)	825	WP_006385948.1	phosphonate ABC transporter, permease protein PhnE	-
PZA07_RS27570 (PZA07_27580)	-	5922112..5923770 (+)	1659	WP_316312138.1	CYTH and CHAD domain-containing protein	-
PZA07_RS27575 (PZA07_27585)	pilA	5923904..5924950 (-)	1047	WP_394817558.1	signal recognition particle-docking protein FtsY	Machinery gene
PZA07_RS27580 (PZA07_27590)	rsmD	5925321..5925887 (+)	567	WP_006385943.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PZA07_RS27585 (PZA07_27595)	coaD	5925946..5926449 (+)	504	WP_006385942.1	pantetheine-phosphate adenylyltransferase	-
PZA07_RS27590 (PZA07_27600)	-	5926628..5926879 (+)	252	WP_006385941.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PZA07_RS27595 (PZA07_27605)	-	5926876..5928096 (+)	1221	WP_006385940.1	benzoate/H(+) symporter BenE family transporter	-
PZA07_RS27600 (PZA07_27610)	-	5928161..5928547 (-)	387	WP_054437790.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 36233.79 Da
• Isoelectric Point: 8.5379

>NTDB_id=798121 PZA07_RS27575 WP_394817558.1 5923904..5924950(-) (pilA) [Achromobacter xylosoxidans strain L7]
MPQQPVAPAPAVSQPAATPSAPVVAPAPAAIVPAPAAPEPEAAPKKASWLSRLKQGLSRTGQSIGGIFVGVKVDENLFEE
LESALIMADAGLEATEKLLTALRARVKKERIEDPAKVKAALRQLLADHLRPLERAFDLKRAQPLVVMIAGVNGAGKTTSI
GKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARGMGVVMVDTAGRLPTQL
HLMEELKKIRRVIAKADPAAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIP
VYWIGVGESLEDLQPFVADEFAGALLAD

Nucleotide

• Length: 1047 bp

>NTDB_id=798121 PZA07_RS27575 WP_394817558.1 5923904..5924950(-) (pilA) [Achromobacter xylosoxidans strain L7]
GTGCCGCAGCAGCCAGTGGCTCCCGCGCCAGCGGTTTCGCAGCCCGCCGCAACGCCGTCGGCGCCGGTCGTCGCCCCGGC
TCCCGCCGCCATTGTGCCGGCGCCCGCCGCGCCCGAACCGGAAGCCGCGCCCAAGAAGGCGTCCTGGCTGTCGCGGCTCA
AGCAGGGCCTGTCGCGCACCGGCCAGAGCATTGGCGGCATTTTCGTCGGCGTCAAGGTCGACGAGAACCTGTTCGAGGAA
CTCGAATCGGCGCTCATTATGGCCGATGCCGGCCTGGAAGCCACCGAGAAGCTGCTGACCGCGCTGCGCGCGCGGGTCAA
GAAAGAACGCATCGAGGACCCGGCCAAGGTCAAGGCCGCGCTGCGCCAGCTGCTGGCCGACCACCTGCGTCCGCTGGAGC
GCGCCTTCGACCTGAAGCGCGCGCAGCCGCTGGTGGTGATGATCGCGGGCGTCAACGGCGCGGGCAAGACCACGTCGATC
GGCAAGCTGGCGCACACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCCGCCGCGCG
CGAGCAACTGATCGAATGGGGCAGCCGCAACAACGTCACCGTGATCTCGCAGGATGGCGGCGACCCGGCGGCGGTGGCGT
TCGACTCGGTCAACGCCGGCCGCGCGCGCGGCATGGGCGTGGTGATGGTGGACACGGCCGGCCGCCTGCCGACCCAGCTG
CACCTGATGGAAGAACTGAAGAAGATCCGCCGCGTCATCGCCAAGGCCGACCCGGCCGCGCCGCACGAGGTGCTGCTGGT
GGTGGACGGCAACACCGGCCAGAACGCGCTGGCGCAGATCCGCGCCTTCGACGCGGCCATCAACCTGACGGGCCTGGTCG
TGACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCGGTGGCGGCGGGCAGCCAGGGCGTGCGGCCGATCCCG
GTGTACTGGATCGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCGTTCGTGGCCGACGAATTCGCCGGAGCCTTGCTGGC
CGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (62-123)

• SRP54-type protein, GTPase domain (SRP54) (144-346)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.543