Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   PY824_RS02855 Genome accession   NZ_CP119172
Coordinates   507207..508292 (+) Length   361 a.a.
NCBI ID   WP_014294114.1    Uniprot ID   A0A380K6B4
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 502207..513292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS02830 (PY824_02830) - 502556..503771 (+) 1216 Protein_485 MFS transporter -
  PY824_RS02835 (PY824_02835) asnA 504143..505135 (+) 993 WP_115266007.1 aspartate--ammonia ligase -
  PY824_RS02840 (PY824_02840) - 505269..506027 (-) 759 Protein_487 hypothetical protein -
  PY824_RS02845 (PY824_02845) rsmD 506160..506699 (+) 540 WP_099390589.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  PY824_RS02850 (PY824_02850) coaD 506732..507229 (+) 498 WP_115266008.1 pantetheine-phosphate adenylyltransferase -
  PY824_RS02855 (PY824_02855) sepM 507207..508292 (+) 1086 WP_014294114.1 SepM family pheromone-processing serine protease Regulator
  PY824_RS02860 (PY824_02860) - 508421..508675 (+) 255 WP_039670536.1 DUF3923 family protein -
  PY824_RS02865 (PY824_02865) - 508745..509242 (-) 498 WP_223246235.1 helix-turn-helix domain-containing protein -
  PY824_RS02870 (PY824_02870) - 509441..509988 (+) 548 Protein_493 aquaporin -
  PY824_RS02875 (PY824_02875) - 510127..510636 (+) 510 WP_039670538.1 hypothetical protein -
  PY824_RS02880 (PY824_02880) - 510749..512074 (+) 1326 WP_115266009.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  PY824_RS02885 (PY824_02885) - 512106..512684 (+) 579 WP_014294121.1 YutD-like domain-containing protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39123.86 Da        Isoelectric Point: 4.1372

>NTDB_id=798041 PY824_RS02855 WP_014294114.1 507207..508292(+) (sepM) [Streptococcus macedonicus strain SGM CIP105683]
MAILKRFKEILKKLGRILYRFKWWILGVVGIAFLLFSLLYPLDYYIEMPGGVYDIRSVLTVDNKEDDEDGSYNFVAVKVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNIADTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVDF
HTSGVGGPSAGLMFTLDIYDQLNGEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVEAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=798041 PY824_RS02855 WP_014294114.1 507207..508292(+) (sepM) [Streptococcus macedonicus strain SGM CIP105683]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGCTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGTTTATG
ATATTCGTAGCGTTTTAACAGTTGATAATAAGGAAGATGATGAAGATGGCTCTTATAATTTTGTGGCTGTCAAGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGCAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAAAATACAGCGACTTATCAAGCCTTAA
CCTTGGCAGGAAAGGAAGCGACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCGCTGATACGGTAACTGGGGTTAATGGTCAGACATTTAACAGTTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAGGTAACAGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGGAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTGATTTT
CATACGAGTGGTGTCGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAATGGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTCA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCGGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GATCCTGATGCGAAAACGAACTATGAAGAAGCTGTCGAAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTCCCAGT
CACAACGGTCCAAGAAGCAATTGACTATCTACGAAACAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380K6B4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.742

94.46

0.64