Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PY824_RS02180 Genome accession   NZ_CP119172
Coordinates   382964..383689 (+) Length   241 a.a.
NCBI ID   WP_014294008.1    Uniprot ID   A0A380K5K3
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 377964..388689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS02150 (PY824_02150) - 378380..379801 (+) 1422 WP_014294002.1 NCS2 family permease -
  PY824_RS02155 (PY824_02155) tsaE 379986..380429 (+) 444 WP_014294003.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PY824_RS02160 (PY824_02160) - 380422..380934 (+) 513 WP_014294004.1 GNAT family N-acetyltransferase -
  PY824_RS02165 (PY824_02165) - 380945..382099 (+) 1155 WP_099390286.1 LCP family protein -
  PY824_RS02170 (PY824_02170) - 382182..382484 (-) 303 WP_014294006.1 hypothetical protein -
  PY824_RS02175 (PY824_02175) - 382481..382900 (-) 420 WP_039670484.1 HIT family protein -
  PY824_RS02180 (PY824_02180) pptA 382964..383689 (+) 726 WP_014294008.1 ABC transporter ATP-binding protein Regulator
  PY824_RS02185 (PY824_02185) - 383691..384725 (+) 1035 WP_014294009.1 ABC transporter permease -
  PY824_RS02190 (PY824_02190) - 384790..385584 (+) 795 WP_099412373.1 cell cycle regulator CcrZ -
  PY824_RS02195 (PY824_02195) trmB 385584..386222 (+) 639 WP_014294011.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PY824_RS02205 (PY824_02205) - 386554..387625 (+) 1072 Protein_374 diguanylate cyclase -
  PY824_RS11630 - 387585..388652 (+) 1068 Protein_375 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26737.08 Da        Isoelectric Point: 4.4206

>NTDB_id=798035 PY824_RS02180 WP_014294008.1 382964..383689(+) (pptA) [Streptococcus macedonicus strain SGM CIP105683]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
EMPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNAIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=798035 PY824_RS02180 WP_014294008.1 382964..383689(+) (pptA) [Streptococcus macedonicus strain SGM CIP105683]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAATGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTGGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGCTATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380K5K3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.498

99.17

0.788
  pptA Streptococcus thermophilus LMD-9

79.079

99.17

0.784