Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   PZO51_RS07720 Genome accession   NZ_CP119170
Coordinates   1674285..1674911 (+) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain LgD10     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1669285..1679911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PZO51_RS07700 (PZO51_07700) - 1669683..1671443 (-) 1761 WP_256459816.1 Lon protease family protein -
  PZO51_RS07705 (PZO51_07705) matP 1671630..1672082 (+) 453 WP_010429344.1 macrodomain Ter protein MatP -
  PZO51_RS07710 (PZO51_07710) ompA 1672147..1673202 (-) 1056 WP_010429345.1 porin OmpA -
  PZO51_RS07715 (PZO51_07715) sulA 1673558..1674067 (-) 510 WP_256460463.1 SOS-induced cell division inhibitor SulA -
  PZO51_RS07720 (PZO51_07720) sxy/tfoX 1674285..1674911 (+) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  PZO51_RS07725 (PZO51_07725) yccS 1674868..1677030 (-) 2163 WP_256459815.1 YccS family putative transporter -
  PZO51_RS07730 (PZO51_07730) - 1677049..1677495 (-) 447 WP_120158488.1 YccF domain-containing protein -
  PZO51_RS07735 (PZO51_07735) helD 1677619..1679673 (+) 2055 WP_303570258.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=798001 PZO51_RS07720 WP_042719042.1 1674285..1674911(+) (sxy/tfoX) [Enterobacter mori strain LgD10]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=798001 PZO51_RS07720 WP_042719042.1 1674285..1674911(+) (sxy/tfoX) [Enterobacter mori strain LgD10]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTCGGTGGGTACACCCTGGCGGTGGATAATGCGGTGTTCGCGATGGTGTCGGAGGGGGAACTCTACCTCCGGGCCTGTG
AAGAAAGTGCCAGGTATTGTGTCAAAAACGCCTCTTCGTTTCTGACGCTGATGAAACGGGGCCGTCCCGTCCTGCTTAAT
TACTATCGGGTGGACGACGGGCTGTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
AAAGGAGCGCTGCCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCAAACCTGACCTTTCAACTTGAGGTACTGCTTT
TAGAAGCAGGCATCACTAATGAGGAAACCTTACGGGAACTGGGCGCCAGGAAATGCTGGTTAAAGATGAGGTCCAAAAAC
AAGGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATTGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGCTGACAGAGTGGTTTAATGCGCTGCCCGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572