Detailed information NTG0797838

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: RBH03_RS18465
• Genome accession: NZ_CP132995
• Coordinates: 3956589..3957614 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain ZYPA192
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3951589..3962614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBH03_RS18440 (RBH03_18445)	aroE	3951791..3952615 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
RBH03_RS18445 (RBH03_18450)	hemF	3952673..3953590 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
RBH03_RS18450 (RBH03_18455)	-	3953781..3954758 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
RBH03_RS18455 (RBH03_18460)	-	3954768..3955325 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
RBH03_RS18460 (RBH03_18465)	dprA	3955366..3956454 (-)	1089	WP_003114641.1	DNA-processing protein DprA	Machinery gene
RBH03_RS18465 (RBH03_18470)	tsaP	3956589..3957614 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
RBH03_RS18470 (RBH03_18475)	def	3957753..3958259 (+)	507	WP_003107059.1	peptide deformylase	-
RBH03_RS18475 (RBH03_18480)	fmt	3958314..3959258 (+)	945	WP_096252951.1	methionyl-tRNA formyltransferase	-
RBH03_RS18480 (RBH03_18485)	rsmB	3959255..3960559 (+)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
RBH03_RS18485 (RBH03_18490)	trkA	3960586..3961959 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
RBH03_RS18490 (RBH03_18495)	-	3962108..3962425 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=797838 RBH03_RS18465 WP_003097294.1 3956589..3957614(-) (tsaP) [Pseudomonas aeruginosa strain ZYPA192]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=797838 RBH03_RS18465 WP_003097294.1 3956589..3957614(-) (tsaP) [Pseudomonas aeruginosa strain ZYPA192]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTTAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAACTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393