Detailed information NTG0797635

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RBH63_RS07675
• Genome accession: NZ_CP132983
• Coordinates: 1223065..1224048 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain ARS-C301
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1218065..1229048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBH63_RS07660	dppA	1219365..1220972 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
RBH63_RS07665	dppB	1221123..1222142 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RBH63_RS07670	dppC	1222152..1223054 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RBH63_RS07675	amiE	1223065..1224048 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
RBH63_RS07680	dppF	1224045..1225049 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RBH63_RS07685	yhjV	1225079..1226350 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
RBH63_RS07690	-	1226826..1226933 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RBH63_RS07695	-	1227309..1227416 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RBH63_RS07700	-	1227792..1227899 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=797635 RBH63_RS07675 WP_001196496.1 1223065..1224048(+) (amiE) [Escherichia coli strain ARS-C301]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=797635 RBH63_RS07675 WP_001196496.1 1223065..1224048(+) (amiE) [Escherichia coli strain ARS-C301]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401