Detailed information NTG0797598

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RAB72_RS23075
• Genome accession: NZ_CP132979
• Coordinates: 4587931..4588914 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain ARS-C101
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4582931..4593914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAB72_RS23050	-	4584080..4584187 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RAB72_RS23055	-	4584563..4584670 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RAB72_RS23060	-	4585046..4585153 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RAB72_RS23065	yhjV	4585629..4586900 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
RAB72_RS23070	dppF	4586930..4587934 (-)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RAB72_RS23075	amiE	4587931..4588914 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
RAB72_RS23080	dppC	4588925..4589827 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RAB72_RS23085	dppB	4589837..4590856 (-)	1020	WP_089608228.1	dipeptide ABC transporter permease DppB	-
RAB72_RS23090	dppA	4591164..4592771 (-)	1608	WP_306687275.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=797598 RAB72_RS23075 WP_001196486.1 4587931..4588914(-) (amiE) [Escherichia coli strain ARS-C101]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=797598 RAB72_RS23075 WP_001196486.1 4587931..4588914(-) (amiE) [Escherichia coli strain ARS-C101]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404