Detailed information NTG0797552

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PXX05_RS10960
• Genome accession: NZ_CP119078
• Coordinates: 2542924..2543976 (-)
• Length: 350 a.a.
• NCBI ID: WP_275088255.1
• Uniprot ID: -
• Organism: Legionella cardiaca strain H63
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2537924..2548976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXX05_RS10930 (PXX05_10930)	-	2538061..2538246 (-)	186	WP_275088250.1	CBU_0585 family protein	-
PXX05_RS10935 (PXX05_10935)	-	2538350..2539351 (+)	1002	WP_275088251.1	adenosine deaminase	-
PXX05_RS10940 (PXX05_10940)	-	2539588..2540055 (-)	468	WP_275088252.1	hypothetical protein	-
PXX05_RS10945 (PXX05_10945)	rpoH	2540427..2541287 (-)	861	WP_275088253.1	RNA polymerase sigma factor RpoH	-
PXX05_RS10950 (PXX05_10950)	ftsX	2541364..2542293 (-)	930	WP_275088254.1	permease-like cell division protein FtsX	-
PXX05_RS10955 (PXX05_10955)	ftsE	2542287..2542937 (-)	651	WP_275090500.1	cell division ATP-binding protein FtsE	-
PXX05_RS10960 (PXX05_10960)	pilA	2542924..2543976 (-)	1053	WP_275088255.1	signal recognition particle-docking protein FtsY	Machinery gene
PXX05_RS10965 (PXX05_10965)	-	2544037..2545359 (+)	1323	WP_275088256.1	M16 family metallopeptidase	-
PXX05_RS10970 (PXX05_10970)	-	2545356..2546660 (+)	1305	WP_275088257.1	M16 family metallopeptidase	-
PXX05_RS10975 (PXX05_10975)	rsmD	2546657..2547205 (+)	549	WP_275088258.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PXX05_RS10980 (PXX05_10980)	dotD	2547366..2547782 (+)	417	WP_275088259.1	type IVB secretion system lipoprotein DotD	-
PXX05_RS10985 (PXX05_10985)	-	2547763..2548680 (+)	918	WP_275088260.1	type IV secretion system DotC family protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38293.03 Da
• Isoelectric Point: 8.0569

>NTDB_id=797552 PXX05_RS10960 WP_275088255.1 2542924..2543976(-) (pilA) [Legionella cardiaca strain H63]
MIKWFKRNQNETESVSSTTDAPLIPQQETQKSQVTANDSFKEGFFARFKKGLSKTRQQLGDGIGRLLLGKKQIDTAMLEE
LETLLLSADLGIETSQTILKQLIDGLARNQLADGDAVFQALKTRLESMLVVCEKPLNVETADKSPFVILTVGVNGAGKTT
SIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARGIDILIADTAGRLH
TQGNLMEELKKVKRVMQKLDPQAPHEVMLVLDASIGQNALNQARQFHEAVGLTGIMMTKLDGTAKGGILFAIANELRIPF
RYLGIGESIDDLRPFNASQFVRAIFNDDQV

Nucleotide

• Length: 1053 bp

>NTDB_id=797552 PXX05_RS10960 WP_275088255.1 2542924..2543976(-) (pilA) [Legionella cardiaca strain H63]
ATGATTAAATGGTTTAAGCGAAATCAAAATGAAACGGAGTCAGTTTCTTCCACGACTGATGCCCCACTAATACCGCAGCA
AGAGACGCAAAAATCTCAAGTCACTGCGAATGACTCTTTTAAAGAAGGCTTTTTTGCTCGTTTCAAAAAAGGCTTAAGTA
AGACACGACAGCAGCTGGGGGATGGCATCGGTCGGTTGCTGTTGGGTAAAAAACAAATTGACACTGCCATGCTTGAAGAG
CTGGAAACACTCTTGCTAAGTGCGGATTTAGGTATCGAAACTTCACAAACCATCTTAAAACAACTGATAGACGGATTAGC
TAGAAACCAGTTAGCTGATGGCGATGCGGTTTTCCAGGCTCTTAAAACACGTTTGGAAAGTATGCTCGTAGTTTGTGAAA
AACCTCTTAATGTAGAAACAGCGGATAAGTCCCCCTTTGTCATTCTAACGGTAGGGGTAAATGGTGCAGGGAAAACCACA
TCCATTGGCAAAATGGCTAAACAATTTCAACAACAAGGTAAGAAAGTCATGCTCGCTGCAGGGGATACTTTCCGAGCAGC
AGCCGTTGAGCAATTGCAGGTTTGGGGTGAACGCAACCAAATTCCTGTGATTGCGCAACACACCGGTGCAGATAGTGCTT
CTGTTATTTACGATGCCTTACAGGCAGCGAAGGCGCGAGGAATCGACATCTTAATAGCAGACACAGCAGGACGGTTACAC
ACTCAAGGCAACTTAATGGAGGAGCTAAAAAAGGTCAAACGAGTTATGCAAAAACTCGATCCACAAGCTCCCCACGAAGT
GATGTTAGTTTTAGATGCAAGCATAGGACAAAATGCCTTGAATCAGGCACGTCAATTCCATGAAGCCGTTGGTTTAACAG
GTATTATGATGACGAAGCTTGATGGGACGGCAAAAGGAGGGATATTGTTTGCAATTGCCAATGAATTAAGAATACCATTC
CGTTATTTGGGGATAGGAGAAAGTATTGATGATCTTCGTCCCTTCAACGCATCACAATTTGTTAGAGCAATTTTTAATGA
TGATCAAGTTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (145-345)

• SRP54-type protein, helical bundle domain (SRP54_N) (59-124)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.786	97.429	0.514