Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   PZB78_RS20685 Genome accession   NZ_CP119073
Coordinates   4024249..4024389 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain SW207     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4019249..4029389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PZB78_RS20680 (PZB78_20655) srfAB 4021113..4024205 (+) 3093 Protein_4014 surfactin non-ribosomal peptide synthetase SrfAB -
  PZB78_RS20685 (PZB78_20660) comS 4024249..4024389 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=797522 PZB78_RS20685 WP_223203921.1 4024249..4024389(+) (comS) [Bacillus halotolerans strain SW207]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=797522 PZB78_RS20685 WP_223203921.1 4024249..4024389(+) (comS) [Bacillus halotolerans strain SW207]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913