Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | PZB78_RS18920 | Genome accession | NZ_CP119073 |
| Coordinates | 3678715..3679005 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus halotolerans strain SW207 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3673715..3684005
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PZB78_RS18880 (PZB78_18855) | darA | 3673736..3674065 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| PZB78_RS18885 (PZB78_18860) | - | 3674078..3674518 (+) | 441 | WP_024123606.1 | YaaR family protein | - |
| PZB78_RS18890 (PZB78_18865) | holB | 3674530..3675519 (+) | 990 | WP_127696182.1 | DNA polymerase III subunit delta' | - |
| PZB78_RS18895 (PZB78_18870) | ricT | 3675522..3676349 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| PZB78_RS18900 (PZB78_18875) | yabA | 3676364..3676723 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| PZB78_RS18905 (PZB78_18880) | - | 3676783..3677526 (+) | 744 | WP_106021672.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| PZB78_RS18910 (PZB78_18885) | - | 3677513..3677812 (+) | 300 | WP_106021673.1 | GIY-YIG nuclease family protein | - |
| PZB78_RS18915 (PZB78_18890) | rsmI | 3677787..3678665 (+) | 879 | WP_103672539.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| PZB78_RS18920 (PZB78_18895) | abrB | 3678715..3679005 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| PZB78_RS18925 (PZB78_18900) | metG | 3679502..3681496 (+) | 1995 | WP_127696180.1 | methionine--tRNA ligase | - |
| PZB78_RS18930 (PZB78_18905) | - | 3681575..3682342 (+) | 768 | WP_044153506.1 | TatD family hydrolase | - |
| PZB78_RS18935 (PZB78_18910) | - | 3682588..3683811 (+) | 1224 | WP_254518285.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=797516 PZB78_RS18920 WP_003226760.1 3678715..3679005(-) (abrB) [Bacillus halotolerans strain SW207]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=797516 PZB78_RS18920 WP_003226760.1 3678715..3679005(-) (abrB) [Bacillus halotolerans strain SW207]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |