Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   Q7C01_RS05870 Genome accession   NZ_CP132975
Coordinates   1245491..1246549 (+) Length   352 a.a.
NCBI ID   WP_184908843.1    Uniprot ID   A0A7W7GHY0
Organism   Streptomyces sp. FXY-T5     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1240491..1251549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7C01_RS05855 (Q7C01_05855) - 1241848..1243461 (+) 1614 WP_266454560.1 ABC transporter substrate-binding protein -
  Q7C01_RS05860 (Q7C01_05860) - 1243595..1244524 (+) 930 WP_030842818.1 ABC transporter permease -
  Q7C01_RS05865 (Q7C01_05865) - 1244517..1245479 (+) 963 WP_266454556.1 ABC transporter permease -
  Q7C01_RS05870 (Q7C01_05870) amiE 1245491..1246549 (+) 1059 WP_184908843.1 ABC transporter ATP-binding protein Regulator
  Q7C01_RS05875 (Q7C01_05875) - 1246542..1247690 (+) 1149 WP_184908842.1 ABC transporter ATP-binding protein -
  Q7C01_RS05880 (Q7C01_05880) - 1247864..1248406 (-) 543 WP_266454552.1 hypothetical protein -
  Q7C01_RS05885 (Q7C01_05885) - 1248557..1249015 (-) 459 WP_306688119.1 GNAT family N-acetyltransferase -
  Q7C01_RS05890 (Q7C01_05890) - 1249249..1251375 (-) 2127 WP_306688120.1 S9 family peptidase -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38362.30 Da        Isoelectric Point: 6.3437

>NTDB_id=797472 Q7C01_RS05870 WP_184908843.1 1245491..1246549(+) (amiE) [Streptomyces sp. FXY-T5]
MTIIDEVAESPAPDGSEGTGRPLLEVRDLHVEFHTRDGIAKAVNGVNYSVSAGETLAVLGESGSGKSVTAQAIMGILDMP
PGRIPSGEILFRGQDMLKMSAEERRKIRGQRIAMIFQDALSSLNPVLSVGYQLAEMFRVHQGMSKKDAKAKAIELMDRVK
IPASAARVNDYPHQFSGGMRQRIMIAMALALEPDLIIADEPTTALDVTVQAQVMDLLAELQREYNMGLILITHDLGVVAD
VADKIAVMYAGRIVETAPVHELYKRPAHPYTKGLLESIPRLDQKGQDLYAIKGLPPNLTRIPSGCAFNPRCPMAQDICRT
DVPLLHPVTERDGGELPGRGSACHFWKETIHG

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=797472 Q7C01_RS05870 WP_184908843.1 1245491..1246549(+) (amiE) [Streptomyces sp. FXY-T5]
GTGACCATCATCGATGAAGTGGCCGAGAGTCCCGCACCGGACGGCTCGGAGGGCACGGGCCGCCCGCTGCTCGAAGTACG
CGACCTGCACGTGGAGTTCCACACCCGTGACGGCATCGCCAAGGCCGTCAACGGCGTCAACTACTCCGTGTCCGCGGGCG
AGACGCTCGCCGTGCTCGGTGAGTCCGGCTCCGGCAAGTCCGTCACCGCCCAGGCCATCATGGGCATCCTCGACATGCCG
CCCGGCCGCATACCCAGCGGCGAGATCCTCTTCCGCGGCCAGGACATGCTGAAGATGTCCGCCGAGGAGCGCCGCAAGAT
CCGCGGTCAGCGCATCGCGATGATCTTCCAGGACGCGCTGTCCTCGCTGAACCCGGTGCTGAGCGTCGGCTATCAGCTCG
CGGAGATGTTCCGCGTCCACCAGGGCATGTCCAAGAAGGACGCCAAGGCCAAGGCCATCGAGCTGATGGACCGGGTGAAG
ATTCCCGCCTCCGCGGCCCGGGTGAACGACTACCCGCACCAGTTCTCGGGCGGTATGCGCCAGCGCATCATGATCGCGAT
GGCGCTCGCCCTGGAGCCGGACCTGATCATCGCCGACGAGCCCACCACGGCCCTCGACGTGACGGTCCAGGCCCAGGTCA
TGGACCTGCTCGCGGAGCTCCAGCGCGAGTACAACATGGGCCTGATCCTGATCACCCACGACCTCGGCGTGGTCGCCGAC
GTCGCGGACAAGATCGCGGTGATGTACGCGGGCCGGATCGTGGAGACCGCGCCCGTGCACGAGCTGTACAAGCGACCCGC
GCACCCCTACACCAAGGGTCTGCTCGAGTCGATCCCGCGCCTGGACCAGAAGGGCCAGGACCTCTACGCGATCAAGGGCC
TGCCGCCCAACCTGACGCGTATTCCGTCCGGTTGTGCCTTCAATCCGCGCTGCCCCATGGCGCAGGACATCTGCCGTACG
GACGTCCCGCTGCTGCACCCGGTCACCGAGCGGGACGGCGGCGAGCTGCCCGGCCGCGGCAGCGCGTGCCACTTCTGGAA
GGAGACGATCCATGGCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(44-202)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(254-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7W7GHY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

52.189

84.375

0.44
  amiE Streptococcus thermophilus LMG 18311

51.014

84.091

0.429
  amiE Streptococcus thermophilus LMD-9

51.014

84.091

0.429
  oppD Streptococcus mutans UA159

47.727

87.5

0.418