Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   PZB78_RS02080 Genome accession   NZ_CP119073
Coordinates   422646..423437 (+) Length   263 a.a.
NCBI ID   WP_106021586.1    Uniprot ID   -
Organism   Bacillus halotolerans strain SW207     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 417646..428437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PZB78_RS02050 (PZB78_02040) - 418490..419521 (+) 1032 WP_101863577.1 iron chelate uptake ABC transporter family permease subunit -
  PZB78_RS02055 (PZB78_02045) - 419636..420514 (+) 879 WP_188323632.1 PhzF family phenazine biosynthesis isomerase -
  PZB78_RS02060 (PZB78_02050) - 420602..421186 (+) 585 WP_106021589.1 nitroreductase -
  PZB78_RS02065 (PZB78_02055) - 421225..421416 (-) 192 WP_106021588.1 YfhD family protein -
  PZB78_RS02070 (PZB78_02060) - 421482..421592 (-) 111 WP_010333447.1 YfhE family protein -
  PZB78_RS02075 (PZB78_02065) - 421646..422557 (-) 912 WP_151174856.1 TIGR01777 family oxidoreductase -
  PZB78_RS02080 (PZB78_02070) recX 422646..423437 (+) 792 WP_106021586.1 recombination regulator RecX Regulator
  PZB78_RS02085 (PZB78_02075) - 423444..423764 (+) 321 WP_106021585.1 YfhH family protein -
  PZB78_RS02090 (PZB78_02080) - 423901..425094 (+) 1194 WP_101860265.1 MFS transporter -
  PZB78_RS02095 (PZB78_02085) - 425127..425279 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  PZB78_RS02100 (PZB78_02090) - 425404..425673 (+) 270 WP_024120650.1 YfhJ family protein -
  PZB78_RS02105 (PZB78_02095) - 425708..426091 (-) 384 WP_044163733.1 hypothetical protein -
  PZB78_RS02110 (PZB78_02100) - 426093..426305 (-) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -
  PZB78_RS02115 (PZB78_02105) - 426498..427016 (+) 519 WP_151174857.1 SH3 domain-containing protein -
  PZB78_RS02120 (PZB78_02110) - 427102..427434 (+) 333 WP_127695650.1 SdpI family protein -
  PZB78_RS02125 (PZB78_02115) - 427421..428284 (+) 864 WP_101860263.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30818.06 Da        Isoelectric Point: 6.3785

>NTDB_id=797447 PZB78_RS02080 WP_106021586.1 422646..423437(+) (recX) [Bacillus halotolerans strain SW207]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSMKEV
EDHLKKKDTSAPVIAEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=797447 PZB78_RS02080 WP_106021586.1 422646..423437(+) (recX) [Bacillus halotolerans strain SW207]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAAAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAATGAAAGAGGTA
GAAGACCATTTAAAGAAAAAAGATACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTGAGCACCCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATTGATGACGACACCATCAAAGATACGCTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.635

100

0.916