Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PZB81_RS01325 Genome accession   NZ_CP119047
Coordinates   310324..310989 (+) Length   221 a.a.
NCBI ID   WP_002447011.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain N2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 305324..315989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PZB81_RS01310 (PZB81_01310) - 306680..308224 (+) 1545 WP_002493793.1 NAD(P)H-binding protein -
  PZB81_RS01315 (PZB81_01315) - 308347..309816 (-) 1470 WP_002437984.1 alkaline phosphatase -
  PZB81_RS01320 (PZB81_01320) - 310114..310293 (+) 180 WP_002447010.1 hypothetical protein -
  PZB81_RS01325 (PZB81_01325) braR 310324..310989 (+) 666 WP_002447011.1 response regulator transcription factor Regulator
  PZB81_RS01330 (PZB81_01330) braS 310995..311891 (+) 897 WP_002494881.1 sensor histidine kinase Regulator
  PZB81_RS01335 (PZB81_01335) - 312002..312751 (+) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  PZB81_RS01340 (PZB81_01340) - 312818..314806 (+) 1989 WP_275113484.1 ABC transporter permease -
  PZB81_RS01345 (PZB81_01345) - 314910..315500 (+) 591 WP_002493795.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25643.77 Da        Isoelectric Point: 5.1924

>NTDB_id=797374 PZB81_RS01325 WP_002447011.1 310324..310989(+) (braR) [Staphylococcus epidermidis strain N2]
MKIFIVEDDLVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=797374 PZB81_RS01325 WP_002447011.1 310324..310989(+) (braR) [Staphylococcus epidermidis strain N2]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACATATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTGCAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGAGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787