Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RA292_RS17185 Genome accession   NZ_CP132912
Coordinates   3336555..3337268 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3331555..3342268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS17165 ghrB 3331699..3332676 (+) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -
  RA292_RS17170 psdB 3332714..3334654 (-) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  RA292_RS17175 psdA 3334629..3335408 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  RA292_RS17180 psdS 3335491..3336561 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  RA292_RS17185 braR 3336555..3337268 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  RA292_RS17190 yvzJ 3337415..3337624 (+) 210 WP_003243327.1 lipoprotein -
  RA292_RS17195 yvcN 3337660..3338424 (-) 765 WP_009968228.1 arylamine N-acetyltransferase -
  RA292_RS17200 crh 3338425..3338682 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  RA292_RS17205 whiA 3338706..3339656 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  RA292_RS17210 mgfK 3339679..3340632 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  RA292_RS17215 rapZ 3340634..3341521 (-) 888 WP_003243903.1 RNase adapter RapZ -
  RA292_RS17220 rppI 3341546..3342022 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=797253 RA292_RS17185 WP_003244535.1 3336555..3337268(-) (braR) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=797253 RA292_RS17185 WP_003244535.1 3336555..3337268(-) (braR) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43