Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RA292_RS14850 Genome accession   NZ_CP132912
Coordinates   2886674..2887369 (-) Length   231 a.a.
NCBI ID   WP_003229133.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2881674..2892369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS14830 yttA 2882101..2882847 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  RA292_RS14835 bceB 2882884..2884824 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  RA292_RS14840 bceA 2884814..2885575 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  RA292_RS14845 bceS 2885677..2886681 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  RA292_RS14850 braR 2886674..2887369 (-) 696 WP_003229133.1 two-component response regulator BceR Regulator
  RA292_RS14855 ytrF 2887466..2888776 (-) 1311 WP_029318285.1 ABC transporter permease YtrF -
  RA292_RS14860 ytrE 2888766..2889461 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  RA292_RS14865 ytrD 2889476..2890453 (-) 978 WP_029726913.1 ABC transporter permease YtrD -
  RA292_RS14870 ytrC 2890483..2891469 (-) 987 WP_029726914.1 ABC transporter permease YtrC -
  RA292_RS14875 ytrB 2891463..2892341 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26865.76 Da        Isoelectric Point: 5.6471

>NTDB_id=797245 RA292_RS14850 WP_003229133.1 2886674..2887369(-) (braR) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNNKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=797245 RA292_RS14850 WP_003229133.1 2886674..2887369(-) (braR) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATAACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377