Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RA292_RS14665 Genome accession   NZ_CP132912
Coordinates   2844892..2845602 (-) Length   236 a.a.
NCBI ID   WP_003229230.1    Uniprot ID   O34977
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2839892..2850602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS14645 cysK 2839943..2840878 (+) 936 WP_003229237.1 cysteine synthase A -
  RA292_RS14650 pepV 2840912..2842303 (-) 1392 WP_004399126.1 dipeptidase PepV -
  RA292_RS14655 pbuO 2842400..2843698 (+) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  RA292_RS14660 ythQ 2843738..2844895 (-) 1158 WP_003229232.1 ABC transporter permease -
  RA292_RS14665 pptA 2844892..2845602 (-) 711 WP_003229230.1 ABC transporter ATP-binding protein Regulator
  RA292_RS14670 ytzE 2845893..2846114 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  RA292_RS14675 rsuA 2846235..2846954 (-) 720 WP_003229226.1 pseudouridine synthase -
  RA292_RS14680 murJ 2847023..2848657 (-) 1635 WP_003229224.1 lipid II flippase MurJ -
  RA292_RS14685 ytfP 2848859..2850121 (+) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26506.56 Da        Isoelectric Point: 5.3508

>NTDB_id=797244 RA292_RS14665 WP_003229230.1 2844892..2845602(-) (pptA) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=797244 RA292_RS14665 WP_003229230.1 2844892..2845602(-) (pptA) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCAGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTTCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATGTTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432