Detailed information NTG0797152

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RA292_RS03275
• Genome accession: NZ_CP132912
• Coordinates: 656878..658008 (+)
• Length: 376 a.a.
• NCBI ID: WP_032677448.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain BN-P15-11-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 651878..663008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA292_RS03260	-	653711..654717 (+)	1007	Protein_613	hypothetical protein	-
RA292_RS03265	-	654932..655369 (+)	438	WP_015252628.1	hypothetical protein	-
RA292_RS03270	-	655572..656732 (+)	1161	WP_003233867.1	lysozyme inhibitor LprI family protein	-
RA292_RS03275	rapC	656878..658008 (+)	1131	WP_032677448.1	response regulator aspartate phosphatase RapH	Regulator
RA292_RS03280	phrH	657998..658171 (+)	174	WP_029317430.1	phosphatase RapH inhibitor PhrH	-
RA292_RS03285	yeeI	658331..659050 (+)	720	WP_003233863.1	YebC/PmpR family DNA-binding transcriptional regulator	-
RA292_RS03290	yeeK	659184..659621 (+)	438	WP_019712803.1	spore coat protein YeeK	-
RA292_RS03295	yezE	659736..660320 (+)	585	WP_003243181.1	TetR/AcrR family transcriptional regulator	-
RA292_RS03300	yesE	660399..660842 (+)	444	WP_019712804.1	nuclear transport factor 2 family protein	-
RA292_RS03305	yesF	660839..661707 (+)	869	Protein_622	NAD-dependent epimerase/dehydratase family protein	-
RA292_RS03310	cotJA	661834..662082 (+)	249	WP_003219489.1	spore coat-associated protein CotJA	-
RA292_RS03315	cotJB	662066..662329 (+)	264	WP_003219491.1	spore coat protein CotJB	-
RA292_RS03320	cotJC	662344..662913 (+)	570	WP_003233850.1	spore coat protein CotJC	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 43990.33 Da
• Isoelectric Point: 5.9921

>NTDB_id=797152 RA292_RS03275 WP_032677448.1 656878..658008(+) (rapC) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVKQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide

• Length: 1131 bp

>NTDB_id=797152 RA292_RS03275 WP_032677448.1 656878..658008(+) (rapC) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGAAGCAGGACATTCAGCAAATGGAAGAAGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTGGACATTTATCAAAACCATCCTCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_7) (222-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.691	100	0.407
rapF	Bacillus subtilis subsp. subtilis str. 168	40.318	100	0.404