Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | L6481_RS06560 | Genome accession | NZ_AP022877 |
| Coordinates | 1292178..1292501 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus cereus strain MRY14-0060 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1287178..1297501
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6481_RS06535 (BCM0060_1215) | - | 1287488..1288774 (+) | 1287 | WP_131260069.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| L6481_RS06540 (BCM0060_1216) | - | 1288966..1289535 (+) | 570 | WP_000767812.1 | signal peptidase I | - |
| L6481_RS06545 (BCM0060_1217) | - | 1289598..1290185 (+) | 588 | WP_000172840.1 | CalY family protein | - |
| L6481_RS06550 (BCM0060_1218) | - | 1290347..1291084 (+) | 738 | WP_236807177.1 | DUF4047 domain-containing protein | - |
| L6481_RS06555 | calY | 1291507..1292100 (+) | 594 | Protein_1206 | biofilm matrix protein CalY | - |
| L6481_RS06560 (BCM0060_1221) | sinR | 1292178..1292501 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| L6481_RS06565 (BCM0060_1222) | - | 1292581..1292715 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| L6481_RS06570 (BCM0060_1223) | inhA1 | 1293059..1295446 (+) | 2388 | WP_087957905.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| L6481_RS06575 (BCM0060_1224) | - | 1295618..1296985 (+) | 1368 | WP_236807178.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=79700 L6481_RS06560 WP_000578878.1 1292178..1292501(-) (sinR) [Bacillus cereus strain MRY14-0060]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=79700 L6481_RS06560 WP_000578878.1 1292178..1292501(-) (sinR) [Bacillus cereus strain MRY14-0060]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |