Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   PYW39_RS01115 Genome accession   NZ_CP118973
Coordinates   238812..239708 (+) Length   298 a.a.
NCBI ID   WP_047211220.1    Uniprot ID   -
Organism   Staphylococcus warneri strain DSM 20316     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 233812..244708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW39_RS01090 - 234418..235884 (+) 1467 WP_103286228.1 poly-gamma-glutamate hydrolase family protein -
  PYW39_RS01095 - 236066..236167 (+) 102 WP_015364644.1 SE2200 family small protein -
  PYW39_RS01100 - 236250..237704 (-) 1455 WP_103286227.1 alkaline phosphatase -
  PYW39_RS01105 - 237961..238119 (+) 159 WP_002467360.1 hypothetical protein -
  PYW39_RS01110 braR 238141..238806 (+) 666 WP_047211221.1 response regulator transcription factor Regulator
  PYW39_RS01115 braS 238812..239708 (+) 897 WP_047211220.1 sensor histidine kinase Regulator
  PYW39_RS01120 - 239812..240558 (+) 747 WP_103286226.1 ABC transporter ATP-binding protein -
  PYW39_RS01125 - 240576..242570 (+) 1995 WP_232012201.1 FtsX-like permease family protein -
  PYW39_RS01130 - 242693..243724 (+) 1032 WP_103286224.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34357.74 Da        Isoelectric Point: 5.6517

>NTDB_id=796996 PYW39_RS01115 WP_047211220.1 238812..239708(+) (braS) [Staphylococcus warneri strain DSM 20316]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPQSALMLGVAIILFIMCIYWWISYLGFQKQEKLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVNIDDL
IKPLIMKYRIHFIEQHTKIHYQSNDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLSIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSDLNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=796996 PYW39_RS01115 WP_047211220.1 238812..239708(+) (braS) [Staphylococcus warneri strain DSM 20316]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACGTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCCAAAGTGCGCTAATGCTTGGTGTAGCAATTATTTTATTTATTATGTGCATTTATTGGTGGA
TCAGTTATTTAGGTTTCCAAAAACAAGAAAAACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCCAATCAAGTGAGACAAGAAATTGTACAAATTGATAACTATA
CTCGTTTAGCACTAAGTTACTTAAAATTACTTAATGAAGCCTCGGATATGACAATCACAGAGGTTAACATAGATGATTTA
ATTAAACCTTTAATTATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTAATGATGATAG
TATCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTGAATAACGCATTAAAATATGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAACGTCTCAACAATTATCTATTAAAGATAACGGGATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGCGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGACTTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607