Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PYW38_RS06065 Genome accession   NZ_CP118958
Coordinates   1174896..1175072 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain DSM 2048     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1169896..1180072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW38_RS06045 clpB 1170223..1172823 (+) 2601 WP_003187936.1 ATP-dependent chaperone ClpB -
  PYW38_RS06050 - 1172857..1173039 (-) 183 WP_001211111.1 YjzD family protein -
  PYW38_RS06055 - 1173195..1173929 (+) 735 WP_002030268.1 hydrolase -
  PYW38_RS06060 - 1173959..1174831 (+) 873 WP_002086991.1 NAD-dependent epimerase/dehydratase family protein -
  PYW38_RS06065 comZ 1174896..1175072 (+) 177 WP_002011319.1 ComZ family protein Regulator
  PYW38_RS06070 fabH 1175506..1176438 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  PYW38_RS06075 fabF 1176470..1177708 (+) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  PYW38_RS06080 - 1177824..1178615 (+) 792 WP_003187941.1 DUF2268 domain-containing protein -
  PYW38_RS06085 - 1178757..1179503 (+) 747 WP_002030367.1 YjbA family protein -
  PYW38_RS06090 - 1179500..1179709 (-) 210 WP_003187948.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=796825 PYW38_RS06065 WP_002011319.1 1174896..1175072(+) (comZ) [Bacillus mycoides strain DSM 2048]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=796825 PYW38_RS06065 WP_002011319.1 1174896..1175072(+) (comZ) [Bacillus mycoides strain DSM 2048]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586