Detailed information NTG0796825

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QU709_RS28245
• Genome accession: NZ_CP132593
• Coordinates: 6332260..6333546 (+)
• Length: 428 a.a.
• NCBI ID: WP_232027459.1
• Uniprot ID: -
• Organism: Streptomyces sp. YU58 strain SX92
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6327260..6338546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU709_RS28215 (QU709_28225)	-	6328248..6328442 (+)	195	WP_059191782.1	hypothetical protein	-
QU709_RS28230 (QU709_28240)	tig	6329053..6330459 (+)	1407	WP_306501477.1	trigger factor	-
QU709_RS28235 (QU709_28245)	clpP	6330740..6331345 (+)	606	WP_232027615.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QU709_RS28240 (QU709_28250)	clpP	6331396..6332076 (+)	681	WP_306501478.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QU709_RS28245 (QU709_28255)	clpX	6332260..6333546 (+)	1287	WP_232027459.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QU709_RS28250 (QU709_28260)	-	6333640..6334596 (-)	957	WP_306501479.1	hypothetical protein	-
QU709_RS28255 (QU709_28265)	-	6334733..6337357 (+)	2625	WP_306501480.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46829.58 Da
• Isoelectric Point: 4.6966

>NTDB_id=796825 QU709_RS28245 WP_232027459.1 6332260..6333546(+) (clpX) [Streptomyces sp. YU58 strain SX92]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEQ
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=796825 QU709_RS28245 WP_232027459.1 6332260..6333546(+) (clpX) [Streptomyces sp. YU58 strain SX92]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGTTGGCCGAGACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGCAG
GCCAAGAAGGCGCTCTCCGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAGGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACCGAGGCGGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGTTGAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCGATCACCCGCGATGTCTCGGGCGAGGGTGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTTCCGCCGCAGGGCGGCCGCAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAACTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTCGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTGGAGCCCCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCGAGGGATTCGCGCGGGCGCGGCTCCGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521