Detailed information NTG0079677

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: L6489_RS26130
• Genome accession: NZ_AP022874
• Coordinates: 5027454..5028803 (-)
• Length: 449 a.a.
• NCBI ID: WP_236787299.1
• Uniprot ID: -
• Organism: Bacillus cereus strain MRY14-0057
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5022454..5033803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6489_RS26110 (BCM0057_5167)	secA	5022776..5025283 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
L6489_RS26115 (BCM0057_5168)	raiA	5025560..5026102 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
L6489_RS26120 (BCM0057_5169)	cspC	5026426..5026623 (-)	198	WP_033656419.1	cold shock protein CspC	-
L6489_RS26125 (BCM0057_5170)	comFC	5026750..5027454 (-)	705	WP_062921932.1	comF operon protein ComFC	-
L6489_RS26130 (BCM0057_5171)	comFA	5027454..5028803 (-)	1350	WP_236787299.1	ATP-dependent helicase ComFA	Machinery gene
L6489_RS26135 (BCM0057_5172)	-	5028931..5030359 (-)	1429	Protein_5103	NlpC/P60 family protein	-
L6489_RS26140 (BCM0057_5173)	-	5030507..5030821 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
L6489_RS26145 (BCM0057_5174)	-	5030995..5031837 (-)	843	WP_236787300.1	DegV family protein	-
L6489_RS26150 (BCM0057_5175)	-	5032077..5032712 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51305.95 Da
• Isoelectric Point: 9.5085

>NTDB_id=79677 L6489_RS26130 WP_236787299.1 5027454..5028803(-) (comFA) [Bacillus cereus strain MRY14-0057]
MVAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGIIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KERAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEISLLLKELDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=79677 L6489_RS26130 WP_236787299.1 5027454..5028803(-) (comFA) [Bacillus cereus strain MRY14-0057]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTATTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAGAGCGGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGTAATTGGAAGAAAA
GCCTTCACCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGCCTGTTATTGAAAGAGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.675	93.096	0.481