Detailed information NTG0796733

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RA165_RS19395
• Genome accession: NZ_CP132550
• Coordinates: 3693155..3694138 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain XL1-Blue
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3688155..3699138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA165_RS19370	bcsF	3688316..3688507 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
RA165_RS19375	bcsG	3688504..3690183 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
RA165_RS19380	ldrD	3690270..3690377 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
RA165_RS19385	yhjV	3690853..3692124 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
RA165_RS19390	dppF	3692154..3693158 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RA165_RS19395	amiE	3693155..3694138 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
RA165_RS19400	dppC	3694149..3695051 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RA165_RS19405	dppB	3695061..3696080 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RA165_RS19410	-	3696244..3696354 (+)	111	Protein_3537	hypothetical protein	-
RA165_RS19415	dppA	3696388..3697995 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=796733 RA165_RS19395 WP_001196486.1 3693155..3694138(-) (amiE) [Escherichia coli strain XL1-Blue]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=796733 RA165_RS19395 WP_001196486.1 3693155..3694138(-) (amiE) [Escherichia coli strain XL1-Blue]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404