Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | PYW30_RS02600 | Genome accession | NZ_CP118950 |
| Coordinates | 517604..519409 (+) | Length | 601 a.a. |
| NCBI ID | WP_042217234.1 | Uniprot ID | - |
| Organism | Lactococcus garvieae subsp. garvieae strain DSM 20684 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 512604..524409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYW30_RS02575 | - | 512759..513583 (-) | 825 | WP_004258989.1 | Cof-type HAD-IIB family hydrolase | - |
| PYW30_RS02580 | - | 513940..515361 (+) | 1422 | WP_042217238.1 | NCS2 family permease | - |
| PYW30_RS02585 | - | 515438..516538 (+) | 1101 | WP_042217237.1 | YdcF family protein | - |
| PYW30_RS10635 | - | 516614..517620 (+) | 1007 | Protein_504 | competence protein CoiA family protein | - |
| PYW30_RS02600 | pepF | 517604..519409 (+) | 1806 | WP_042217234.1 | oligoendopeptidase F | Regulator |
| PYW30_RS02605 | - | 519409..520092 (+) | 684 | WP_004258974.1 | O-methyltransferase | - |
| PYW30_RS02610 | - | 520190..521098 (+) | 909 | WP_017370843.1 | peptidyl-prolyl cis-trans isomerase | - |
| PYW30_RS02615 | - | 521468..522727 (-) | 1260 | WP_042219922.1 | IS110 family transposase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 69787.38 Da Isoelectric Point: 4.7340
>NTDB_id=796686 PYW30_RS02600 WP_042217234.1 517604..519409(+) (pepF) [Lactococcus garvieae subsp. garvieae strain DSM 20684]
MAKKRDEIAENLTWDLSTVFENDAAWELELKRVSEKLETVNAYEGHLLDSAQSLLEITEMELEISRAVEKVYVYASMKHD
QDTQVSLYQEYEAKATNLYAKFGESFAFYEPEFLALTPERYESFRREEPKLEHYSHMFERLFAKKEHILSPKEEKLLASA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISLMESKERKVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKMRGYHSARQAALSSNFIPEEVYDKLLESVNKYLPLLHRYIKLREQILGLEDDLKMYDVYTPLSDLDYKFNYPEAV
EKAQEVLQILGPEYAHHVKKAFEERWIDVAENSGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAASTDEKVRFAILNHWLDGFRGTVFRQSQFAEFEHEIHKADQEGKVLTSE
FMNQLYAELNEKYYGLPARENPEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVNGGTDAREKYLTYLKAGSSDYP
LAVIAQAGVDMEETTYLESAFAVFEKRLIELEKLVEKGAHL
MAKKRDEIAENLTWDLSTVFENDAAWELELKRVSEKLETVNAYEGHLLDSAQSLLEITEMELEISRAVEKVYVYASMKHD
QDTQVSLYQEYEAKATNLYAKFGESFAFYEPEFLALTPERYESFRREEPKLEHYSHMFERLFAKKEHILSPKEEKLLASA
SEIFGAAAETFEIFDNADIELPMIKDEKGQEVQLTHGNYISLMESKERKVRKAAYQALYSNYEQYQHTYAKTLQTNVKVH
NFKAKMRGYHSARQAALSSNFIPEEVYDKLLESVNKYLPLLHRYIKLREQILGLEDDLKMYDVYTPLSDLDYKFNYPEAV
EKAQEVLQILGPEYAHHVKKAFEERWIDVAENSGKRSGAYSGGCYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTESLLAASTDEKVRFAILNHWLDGFRGTVFRQSQFAEFEHEIHKADQEGKVLTSE
FMNQLYAELNEKYYGLPARENPEIQYEWARIPHFYYNYYVFQYATGFAAATYLAEAIVNGGTDAREKYLTYLKAGSSDYP
LAVIAQAGVDMEETTYLESAFAVFEKRLIELEKLVEKGAHL
Nucleotide
Download Length: 1806 bp
>NTDB_id=796686 PYW30_RS02600 WP_042217234.1 517604..519409(+) (pepF) [Lactococcus garvieae subsp. garvieae strain DSM 20684]
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACTGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGAGTTTCGGAAAAATTAGAGACGGTAAACGCCTACGAAGGACATCTTCTAGATAGCGCTCAAAGCT
TATTAGAAATCACGGAAATGGAGCTAGAAATCTCGCGTGCTGTGGAAAAGGTTTATGTCTATGCCTCAATGAAGCATGAC
CAAGATACGCAAGTGAGCCTTTACCAAGAATACGAAGCCAAAGCCACAAATTTATATGCCAAGTTTGGTGAAAGCTTTGC
TTTTTACGAGCCGGAATTTTTAGCTTTAACGCCAGAACGTTATGAAAGTTTTAGAAGAGAAGAACCTAAACTGGAACACT
ATTCCCATATGTTTGAACGCCTTTTTGCTAAAAAGGAGCATATTTTAAGTCCAAAAGAGGAAAAACTTTTAGCCAGTGCG
AGTGAGATTTTTGGTGCTGCGGCCGAAACCTTTGAAATTTTTGACAATGCTGATATTGAACTTCCGATGATTAAAGATGA
AAAAGGACAGGAAGTACAGCTGACACATGGCAATTATATCTCGCTCATGGAAAGTAAGGAGCGTAAGGTACGAAAGGCAG
CTTATCAAGCCCTTTATAGCAACTATGAACAGTATCAACACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCAAAGATGCGGGGCTACCATTCAGCTCGTCAGGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTCTA
CGATAAGCTCTTAGAGTCTGTCAATAAATATTTGCCTCTTTTACATCGCTATATTAAATTGCGTGAACAGATTTTAGGCT
TAGAAGACGATTTAAAGATGTATGATGTTTATACACCCTTATCGGACTTGGATTATAAGTTTAACTACCCAGAGGCAGTA
GAGAAAGCCCAAGAAGTTCTTCAAATTTTGGGGCCTGAATATGCGCACCATGTAAAAAAAGCTTTTGAGGAGCGTTGGAT
TGATGTGGCAGAAAATAGCGGTAAACGTTCGGGTGCTTACTCAGGTGGATGCTATGATACAAATGCTTTTATGCTGTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTCACCTTAGTACATGAAATGGGGCACAGTATGCATTCCACATTTACACGGGAA
AATCAACCTTATGTTTATGGGGACTATCCAATCTTTCTTGCAGAAATTGCTTCAACAACCAATGAGAATATCTTGACTGA
AAGTTTACTTGCGGCCTCGACAGATGAAAAAGTGCGTTTTGCTATTTTAAACCACTGGCTTGATGGTTTCCGTGGCACTG
TTTTTCGTCAAAGTCAATTTGCTGAATTTGAACATGAAATACATAAAGCTGATCAAGAAGGAAAAGTTTTGACCAGTGAA
TTCATGAACCAGCTTTATGCAGAACTTAATGAAAAATACTATGGTTTACCCGCCCGGGAAAATCCTGAAATTCAGTATGA
GTGGGCCCGCATTCCGCACTTCTATTACAACTATTATGTCTTCCAATATGCTACTGGCTTTGCTGCAGCAACTTATCTTG
CTGAGGCTATCGTTAATGGTGGGACAGATGCGCGTGAAAAATACCTCACTTATCTCAAAGCCGGATCAAGTGATTATCCC
CTGGCTGTGATTGCTCAAGCAGGTGTGGATATGGAAGAAACAACATATTTAGAATCAGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTAGAAAAATTAGTCGAAAAAGGAGCCCATTTATAA
ATGGCAAAAAAACGTGATGAAATAGCTGAAAACTTAACTTGGGATTTGTCAACTGTATTTGAAAATGATGCCGCCTGGGA
ACTTGAACTTAAAAGAGTTTCGGAAAAATTAGAGACGGTAAACGCCTACGAAGGACATCTTCTAGATAGCGCTCAAAGCT
TATTAGAAATCACGGAAATGGAGCTAGAAATCTCGCGTGCTGTGGAAAAGGTTTATGTCTATGCCTCAATGAAGCATGAC
CAAGATACGCAAGTGAGCCTTTACCAAGAATACGAAGCCAAAGCCACAAATTTATATGCCAAGTTTGGTGAAAGCTTTGC
TTTTTACGAGCCGGAATTTTTAGCTTTAACGCCAGAACGTTATGAAAGTTTTAGAAGAGAAGAACCTAAACTGGAACACT
ATTCCCATATGTTTGAACGCCTTTTTGCTAAAAAGGAGCATATTTTAAGTCCAAAAGAGGAAAAACTTTTAGCCAGTGCG
AGTGAGATTTTTGGTGCTGCGGCCGAAACCTTTGAAATTTTTGACAATGCTGATATTGAACTTCCGATGATTAAAGATGA
AAAAGGACAGGAAGTACAGCTGACACATGGCAATTATATCTCGCTCATGGAAAGTAAGGAGCGTAAGGTACGAAAGGCAG
CTTATCAAGCCCTTTATAGCAACTATGAACAGTATCAACACACTTATGCTAAAACGCTACAAACAAATGTAAAAGTCCAT
AATTTTAAGGCAAAGATGCGGGGCTACCATTCAGCTCGTCAGGCAGCTTTATCAAGTAATTTTATTCCGGAAGAAGTCTA
CGATAAGCTCTTAGAGTCTGTCAATAAATATTTGCCTCTTTTACATCGCTATATTAAATTGCGTGAACAGATTTTAGGCT
TAGAAGACGATTTAAAGATGTATGATGTTTATACACCCTTATCGGACTTGGATTATAAGTTTAACTACCCAGAGGCAGTA
GAGAAAGCCCAAGAAGTTCTTCAAATTTTGGGGCCTGAATATGCGCACCATGTAAAAAAAGCTTTTGAGGAGCGTTGGAT
TGATGTGGCAGAAAATAGCGGTAAACGTTCGGGTGCTTACTCAGGTGGATGCTATGATACAAATGCTTTTATGCTGTTAA
ACTGGCAAGAAACTTTGGATGATTTGTTCACCTTAGTACATGAAATGGGGCACAGTATGCATTCCACATTTACACGGGAA
AATCAACCTTATGTTTATGGGGACTATCCAATCTTTCTTGCAGAAATTGCTTCAACAACCAATGAGAATATCTTGACTGA
AAGTTTACTTGCGGCCTCGACAGATGAAAAAGTGCGTTTTGCTATTTTAAACCACTGGCTTGATGGTTTCCGTGGCACTG
TTTTTCGTCAAAGTCAATTTGCTGAATTTGAACATGAAATACATAAAGCTGATCAAGAAGGAAAAGTTTTGACCAGTGAA
TTCATGAACCAGCTTTATGCAGAACTTAATGAAAAATACTATGGTTTACCCGCCCGGGAAAATCCTGAAATTCAGTATGA
GTGGGCCCGCATTCCGCACTTCTATTACAACTATTATGTCTTCCAATATGCTACTGGCTTTGCTGCAGCAACTTATCTTG
CTGAGGCTATCGTTAATGGTGGGACAGATGCGCGTGAAAAATACCTCACTTATCTCAAAGCCGGATCAAGTGATTATCCC
CTGGCTGTGATTGCTCAAGCAGGTGTGGATATGGAAGAAACAACATATTTAGAATCAGCTTTTGCTGTTTTTGAAAAACG
TTTAATTGAGCTAGAAAAATTAGTCGAAAAAGGAGCCCATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
64.892 |
100 |
0.649 |