Detailed information NTG0796283

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: PWO50_RS02685
• Genome accession: NZ_CP118914
• Coordinates: 594008..595138 (-)
• Length: 376 a.a.
• NCBI ID: WP_210797612.1
• Uniprot ID: -
• Organism: Pseudoalteromonas ostreae strain hOe-125
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 589008..600138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWO50_RS02655	-	589730..590203 (+)	474	WP_210797617.1	hypothetical protein	-
PWO50_RS02660	rsmE	590309..591043 (+)	735	WP_210797616.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
PWO50_RS02665	gshB	591098..592051 (+)	954	WP_210797615.1	glutathione synthase	-
PWO50_RS02670	-	592079..592636 (+)	558	WP_210797614.1	YqgE/AlgH family protein	-
PWO50_RS02675	ruvX	592671..593117 (+)	447	WP_210797613.1	Holliday junction resolvase RuvX	-
PWO50_RS02680	-	593080..594006 (-)	927	WP_215909092.1	hypothetical protein	-
PWO50_RS02685	pilU	594008..595138 (-)	1131	WP_210797612.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
PWO50_RS02690	pilT	595158..596198 (-)	1041	WP_210797611.1	type IV pilus twitching motility protein PilT	Machinery gene
PWO50_RS02695	-	596201..596914 (+)	714	WP_275074492.1	YggS family pyridoxal phosphate-dependent enzyme	-
PWO50_RS02700	proC	596930..597751 (+)	822	WP_210797609.1	pyrroline-5-carboxylate reductase	-
PWO50_RS02705	-	597809..598342 (+)	534	WP_210797608.1	YggT family protein	-
PWO50_RS02710	-	598394..598837 (+)	444	WP_210797607.1	DUF4426 domain-containing protein	-
PWO50_RS02715	-	598841..599440 (+)	600	WP_210797606.1	XTP/dITP diphosphatase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 41636.70 Da
• Isoelectric Point: 6.1358

>NTDB_id=796283 PWO50_RS02685 WP_210797612.1 594008..595138(-) (pilU) [Pseudoalteromonas ostreae strain hOe-125]
MTHSLDYFLHLMIEKQGSDLFVSSQLPVSAKINGELIALGDDKISDEQSLQLVESAMSEKQKAEFHNTKECNFAIATEEG
RFRISAFWQRDCAGMVIRRIVTQIPDVAELGLPSTLTDVIMAKRGLVLFVGGTGTGKSTSLAALLGYRNRNQRGHILTIE
DPIEFVHEHRKSIITQREVGLDTESFEAALKSSLRQAPDVILIGEIRSQETMEYALSFAETGHLCVATLHANNANQAIDR
IMHLVPKEKHDKLKYDLSLNLRAIIAQQLVPTADGNGRVAAIEILLNTPIVGELIKKGDIGGIKEAMAKAKDMGMQTFDQ
ALFELYKQQRINYADALHYADSPNDLRLMIKLRNNEQQGAGFLQGVTIDGLEPKGQ

Nucleotide

• Length: 1131 bp

>NTDB_id=796283 PWO50_RS02685 WP_210797612.1 594008..595138(-) (pilU) [Pseudoalteromonas ostreae strain hOe-125]
ATGACACATTCTCTTGATTACTTTTTACATTTAATGATTGAAAAGCAAGGTTCGGATTTATTTGTATCAAGCCAATTGCC
GGTCAGCGCAAAGATTAATGGCGAACTGATAGCATTGGGCGACGACAAAATATCAGACGAGCAGTCGCTGCAGTTAGTTG
AATCAGCGATGAGCGAAAAACAAAAAGCAGAGTTTCATAATACCAAAGAATGTAACTTTGCGATTGCCACCGAGGAAGGG
CGCTTTAGGATCTCGGCATTTTGGCAACGTGACTGTGCGGGTATGGTTATTCGCCGTATTGTTACGCAAATTCCTGATGT
TGCTGAGCTTGGTCTACCTTCGACATTGACCGATGTGATCATGGCTAAACGTGGTTTAGTGCTGTTTGTCGGTGGTACTG
GCACAGGTAAATCAACGTCGTTAGCTGCATTGTTGGGTTACCGTAACCGTAATCAACGCGGCCATATTTTGACCATCGAA
GATCCGATTGAATTTGTTCATGAACATCGCAAAAGTATTATTACTCAGCGTGAAGTTGGCTTAGATACGGAAAGTTTTGA
AGCGGCGTTAAAAAGCTCATTACGCCAAGCGCCCGATGTAATTTTAATTGGTGAAATACGTTCGCAAGAGACCATGGAAT
ACGCACTTAGTTTTGCTGAAACAGGTCATTTATGTGTTGCTACTTTGCATGCCAATAACGCTAACCAAGCAATTGACCGT
ATTATGCATTTAGTGCCTAAAGAAAAGCACGATAAGCTTAAATATGATCTATCTTTAAATCTACGCGCGATCATTGCCCA
GCAGTTAGTGCCTACCGCAGATGGCAATGGCCGTGTCGCTGCTATCGAAATTTTGTTAAACACCCCAATTGTTGGCGAAC
TTATCAAAAAAGGGGATATTGGCGGTATTAAAGAAGCGATGGCTAAAGCGAAAGACATGGGGATGCAAACCTTTGATCAG
GCGCTCTTTGAGCTTTATAAACAGCAGCGAATTAACTATGCTGATGCATTACATTATGCTGATTCACCAAATGATTTACG
TTTGATGATTAAGCTGAGAAATAACGAGCAGCAAGGAGCTGGTTTTTTACAGGGAGTGACCATTGACGGGTTAGAGCCTA
AAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (48-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.026	92.819	0.548
pilU	Acinetobacter baylyi ADP1	55.376	98.936	0.548
pilU	Vibrio cholerae strain A1552	55.616	97.074	0.54
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.407	96.809	0.42