Detailed information NTG0796270

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PXG99_RS17405
• Genome accession: NZ_CP118911
• Coordinates: 3459415..3460578 (+)
• Length: 387 a.a.
• NCBI ID: WP_103042075.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XRD006
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3454415..3465578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXG99_RS17385 (PXG99_17385)	-	3454822..3456018 (+)	1197	WP_029972825.1	glycosyltransferase	-
PXG99_RS17390 (PXG99_17390)	-	3456151..3457227 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
PXG99_RS17395 (PXG99_17395)	-	3457326..3458540 (-)	1215	WP_014419013.1	LCP family protein	-
PXG99_RS17400 (PXG99_17400)	-	3458545..3459192 (-)	648	WP_007614107.1	YigZ family protein	-
PXG99_RS17405 (PXG99_17405)	degS	3459415..3460578 (+)	1164	WP_103042075.1	two-component sensor histidine kinase DegS	Regulator
PXG99_RS17410 (PXG99_17410)	degU	3460655..3461344 (+)	690	WP_103042074.1	two-component system response regulator DegU	Regulator
PXG99_RS17415 (PXG99_17415)	-	3461442..3462290 (+)	849	WP_003151387.1	DegV family protein	-
PXG99_RS17420 (PXG99_17420)	comFA	3462398..3463783 (+)	1386	WP_029972824.1	DEAD/DEAH box helicase	Machinery gene
PXG99_RS17425 (PXG99_17425)	-	3463841..3464125 (+)	285	WP_003151389.1	competence protein ComFB	-
PXG99_RS17430 (PXG99_17430)	comFC	3464131..3464820 (+)	690	WP_199449054.1	ComF family protein	Machinery gene
PXG99_RS17435 (PXG99_17435)	-	3464894..3465313 (+)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44998.74 Da
• Isoelectric Point: 6.8616

>NTDB_id=796270 PXG99_RS17405 WP_103042075.1 3459415..3460578(+) (degS) [Bacillus velezensis strain XRD006]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDPRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=796270 PXG99_RS17405 WP_103042075.1 3459415..3460578(+) (degS) [Bacillus velezensis strain XRD006]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCCTCGCCAAGTGGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948