Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   PXG99_RS12850 Genome accession   NZ_CP118911
Coordinates   2567990..2568154 (-) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain XRD006     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2562990..2573154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXG99_RS12850 (PXG99_12850) comS 2567990..2568154 (-) 165 WP_269194677.1 competence protein ComS Regulator
  PXG99_RS12855 (PXG99_12855) - 2568219..2569856 (-) 1638 Protein_2529 non-ribosomal peptide synthetase -
  PXG99_RS12860 (PXG99_12860) - 2569811..2571247 (-) 1437 WP_230113408.1 condensation domain-containing protein -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=796254 PXG99_RS12850 WP_269194677.1 2567990..2568154(-) (comS) [Bacillus velezensis strain XRD006]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=796254 PXG99_RS12850 WP_269194677.1 2567990..2568154(-) (comS) [Bacillus velezensis strain XRD006]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGGAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5