Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PXG99_RS08380 Genome accession   NZ_CP118911
Coordinates   1726784..1726975 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain XRD006     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1721784..1731975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXG99_RS08355 (PXG99_08355) - 1722142..1723128 (-) 987 WP_025284553.1 ABC transporter ATP-binding protein -
  PXG99_RS08360 (PXG99_08360) - 1723302..1724087 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  PXG99_RS08365 (PXG99_08365) fabF 1724171..1725409 (-) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  PXG99_RS08370 (PXG99_08370) - 1725432..1726370 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  PXG99_RS08375 (PXG99_08375) - 1726537..1726755 (+) 219 WP_007409123.1 hypothetical protein -
  PXG99_RS08380 (PXG99_08380) comZ 1726784..1726975 (-) 192 WP_003155061.1 ComZ family protein Regulator
  PXG99_RS08385 (PXG99_08385) med 1726988..1727941 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  PXG99_RS08390 (PXG99_08390) - 1728032..1728598 (-) 567 WP_017417444.1 hypothetical protein -
  PXG99_RS08395 (PXG99_08395) - 1728681..1729415 (-) 735 WP_022553564.1 hypothetical protein -
  PXG99_RS08400 (PXG99_08400) - 1729676..1729861 (+) 186 WP_007409129.1 YjzD family protein -
  PXG99_RS08405 (PXG99_08405) - 1729898..1730077 (-) 180 WP_003155070.1 YjzC family protein -
  PXG99_RS08410 (PXG99_08410) argF 1730153..1731124 (-) 972 WP_029973149.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=796240 PXG99_RS08380 WP_003155061.1 1726784..1726975(-) (comZ) [Bacillus velezensis strain XRD006]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=796240 PXG99_RS08380 WP_003155061.1 1726784..1726975(-) (comZ) [Bacillus velezensis strain XRD006]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794