Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   PXG99_RS01490 Genome accession   NZ_CP118911
Coordinates   276139..276939 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain XRD006     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 271139..281939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXG99_RS01470 (PXG99_01470) - 271261..272106 (+) 846 WP_029973888.1 TlyA family RNA methyltransferase -
  PXG99_RS01475 (PXG99_01475) argR 272203..272652 (+) 450 WP_003153173.1 transcriptional regulator ArgR -
  PXG99_RS01480 (PXG99_01480) recN 272684..274414 (+) 1731 WP_007408359.1 DNA repair protein RecN Machinery gene
  PXG99_RS01485 (PXG99_01485) spoIVB 274578..275858 (+) 1281 WP_029973889.1 SpoIVB peptidase -
  PXG99_RS01490 (PXG99_01490) spo0A 276139..276939 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  PXG99_RS01495 (PXG99_01495) alr 277087..278268 (-) 1182 WP_021494302.1 alanine racemase -
  PXG99_RS01500 (PXG99_01500) - 278443..278655 (-) 213 WP_014418351.1 spore germination protein -
  PXG99_RS01505 (PXG99_01505) - 278781..278993 (-) 213 WP_029973891.1 spore germination protein -
  PXG99_RS01510 (PXG99_01510) - 279119..280237 (-) 1119 WP_029973892.1 NADH-dependent flavin oxidoreductase -
  PXG99_RS01515 (PXG99_01515) - 280331..280468 (-) 138 WP_014470646.1 hypothetical protein -
  PXG99_RS01520 (PXG99_01520) - 280759..281391 (-) 633 WP_014418348.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=796224 PXG99_RS01490 WP_003153177.1 276139..276939(+) (spo0A) [Bacillus velezensis strain XRD006]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=796224 PXG99_RS01490 WP_003153177.1 276139..276939(+) (spo0A) [Bacillus velezensis strain XRD006]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCTGATGTACTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGATGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97